Raphanus sativus (radish): 108806467
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Entry
108806467 CDS
T06014
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108806467
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108806467
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108806467
03036 Chromosome and associated proteins [BR:
rsz03036
]
108806467
Protein phosphatases and associated proteins [BR:
rsz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108806467
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108806467
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108806467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
108806467
NCBI-ProteinID:
XP_018434098
UniProt:
A0A6J0JEQ2
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All DBs
Position
6:15550317..15554658
Genome browser
AA seq
536 aa
AA seq
DB search
MSMVDDDMASLDADLLQLPEMSTFVLKSRPDFTQKLFDQWLSLPEANRQVASLLQDAMSG
APLNVPGSASGSGPGTTNSLPSMFPAGSAPPLSPRSCGSPRTMKQRAPSNLGSPLKVLNE
PVKESIPQFYFQNGPPPPTEIKDQCMFRVNHFFYGHMDGLQIQEFKLVTREICKLPSFFS
TSLFRKIDVNSTGFVTREAFIDYWVNGNMLIMDMTTQIFKILKQQNQNFIVKEDFKPLLK
ELLATHPGLEFLQGTPEFQERYAETVTYRIFYYINRSGNGRLTFRELKRGNLIDAMLHAD
EEEDINKVLRYFSYEHFYVIYCKFWELDSDHDFLIDKENLMKYGNHALTYRIVDRVFSQV
ARKFTSKIEGKMGYEDFVYFILAEEDKSSEPSLEYWFKCVDLDGNGIITRNEMQFFYEEQ
LHRMECMAQEAVLFEDILCQIIDMIGPEEESYITLSDLKGSKLSGNVFNILFNLNKFMAF
ETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDASNGSAEVWDESLEAPF
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggtcgacgacgacatggcttctctcgatgccgatttactccagctccctgag
atgtctaccttcgtcctcaaatcgagacccgatttcacccagaagctcttcgatcagtgg
ctttctctccccgaagctaatcgacaggttgcatcattgcttcaagatgcaatgtctggg
gctcctttgaatgttcctggaagtgcatctggttctggtcctggcaccaccaattcttta
ccttccatgttcccagccggaagtgctcctccactttcacctagaagctgcggttcaccg
cgcacgatgaagcagagggctccttctaatttaggctctcctcttaaagtgctcaacgag
cctgttaaagagtccatacctcagttttattttcaaaatggtcccccacctccaactgag
atcaaagatcaatgtatgtttagagtcaaccactttttctatggccatatggatggactg
caaatacaagaattcaaattagtcaccagagaaatctgcaagctcccatcattcttctcc
acctcacttttcaggaagatcgatgtcaatagtacaggttttgttactagagaagcattt
attgattattgggtaaacgggaacatgttgataatggatatgacgacccaaatatttaag
atactaaagcagcaaaatcaaaacttcattgtcaaggaggattttaagccactacttaaa
gaacttttagcaacgcatcctggactagagtttttgcaaggcacacctgaatttcaagaa
agatacgctgaaactgttacctacagaatcttttactacataaatagatctggaaatggg
cgacttacatttagggagcttaaacgaggaaatttaattgatgctatgcttcatgctgac
gaagaagaagatatcaacaaagtgttgaggtacttttcgtatgagcatttctatgtcata
tactgcaagttctgggagctggattcagatcatgatttcctgattgacaaagaaaacctt
atgaaatatggcaaccatgctctaacttaccggattgtcgacagagtattctcccaggtt
gctaggaagtttactagcaaaattgaagggaaaatggggtatgaggattttgtctatttt
attctcgcggaagaagataaatcgtcagagccgagcctagaatactggtttaagtgcgta
gacttggatgggaatgggattattacgcgaaatgagatgcagttcttctatgaggagcag
ttgcatcgaatggagtgtatggcgcaagaggctgttcttttcgaggatatcctatgccag
ataattgatatgatcggaccagaggaggaaagctatataaccctgagtgacctgaaaggc
tccaaactctctggaaacgtcttcaacatcctttttaatcttaataagtttatggcattt
gaaacacgggatccgttcctcattcgccaggaacgtgaaaaccctacattgacagagtgg
gatcgttttgcacatagagagtacataaggctttcaatggaagaagatgttgaagatgct
tccaatggaagtgctgaggtttgggatgagtcattggaggctcccttctga
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