KEGG   Raphanus sativus (radish): 108806578
Entry
108806578         CDS       T06014                                 
Name
(RefSeq) SEC12-like protein 2
  KO
K14003  prolactin regulatory element-binding protein
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108806578
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108806578
Membrane trafficking [BR:rsz04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    108806578
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz ANAPC4_WD40 WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st WDR90_beta-prop_4th PEP5_VPS11_N Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_CAF1B_HIR1 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_RIG_1st Orf78
Other DBs
NCBI-GeneID: 108806578
NCBI-ProteinID: XP_018434232
UniProt: A0A6J0JF26
LinkDB
Position
6:19281702..19284082
AA seq 398 aa
MANQIPESNQPSNTQTYGFPIYAADWIPEETVRSKIDKDQNNSEDDGSESSSSPSSSTTS
RSCIVLAGGGGEGRSGIANVVLICRVDLDTKSLSEQPVGRIVLGTDLPYRMAVHPRGGGL
VCALPNSCKRFDWENIMSPREGGEEGEEVIKELKDVGQQLALAFNQEGSVLAAGGEDGTL
RIFEWPSMKTLLDESKAHSSVKNLTFSESGKFLVSLGGPLCRVWDVNASAAIASLSKEKD
EMFAYCRFSVDNAGNEVLYIAANTERGGSIITWDTTTWKRRRSKLMKNYSISAFNVSADG
TLLALGNMEGDVLIIDSTKMKTHQLVKKAHLGLVTALSFSPDSRCLVSVSFDSRAKLTVI
EKTAEKHGVNWLVMFLLCVLLYVVSYYFLMAKGIIAKN
NT seq 1197 nt   +upstreamnt  +downstreamnt
atggcgaatcagattccagagagcaatcaaccgtcgaatacgcagacctacggctttccg
atctacgccgccgactggatcccggaagaaaccgtcagatcgaaaatcgacaaggatcag
aacaactccgaagatgacggcagcgagtcttcttcttctccgtcttcgtcgacgacctcc
cggagctgcatcgttttggcgggaggaggcggagagggacgaagcgggatcgctaacgtc
gtcttaatatgtcgtgttgatctcgacaccaaatctctctccgaacaacctgtgggtagg
attgtgcttggtactgatctgccttacaggatggctgttcatcctcgtggaggtggcctt
gtttgcgcattgcctaacagttgcaaacggtttgattgggagaacattatgagtccaaga
gagggtggtgaagaaggagaggaagtgattaaagagttgaaggacgttgggcaacagtta
gctttggcgtttaatcaggaggggtccgtgcttgcggctggtggggaggatgggactttg
aggatttttgaatggcctagtatgaaaacgttacttgatgagtctaaggcacattcatca
gttaaaaacctaactttcagcgaaagtggtaagtttcttgtgtcacttggaggtccactt
tgtcgggtttgggacgtaaatgcttctgctgccattgccagtctatcaaaagagaaggat
gagatgtttgcttactgcagattctctgttgacaatgcaggcaatgaagttctttacatt
gctgcaaacactgaacgtggtgggagtattataacatgggatacaacaacatggaaaaga
agacgttcaaagcttatgaaaaactactctatctccgcctttaatgtctcagctgatggg
acgcttcttgcacttggaaacatggaaggagatgttttgataattgattcaacaaaaatg
aagacccaccaattggtcaagaaagctcatctcggtttggtcaccgcactgagtttctcc
cctgattcaaggtgcttagtgtcagtatcttttgactcgagggcaaagctaactgtcatt
gagaaaacggctgaaaaacatggagtaaactggctggttatgtttttgttgtgcgtgttg
ctatacgtggtttcctattatttcttgatggcaaaggggatcatagctaaaaattag

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