Raphanus sativus (radish): 108806613
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Entry
108806613 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108806613
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108806613
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
108806613
Ribosome biogenesis [BR:
rsz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
108806613
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
RlmN_N
Fer4_12
Radical_SAM_2
Motif
Other DBs
NCBI-GeneID:
108806613
NCBI-ProteinID:
XP_018434271
UniProt:
A0A6J0JGX0
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All DBs
Position
6:50502311..50504828
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AA seq
428 aa
AA seq
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MMTTTTNTIAMLHNLVFSVPISRMVVRRYSLSTTAAAAAISTTATTSVNPPKPVRTPHVD
SQVLLGMSEPELQQLAIKLGQEGYRGKQLHHLIYKRKAKQVEDFSNLPQTFRKELVESGY
KVGRSPIYQTVTATDGTIKLLLKLEDNLLIETVGIPVQEEKGITRLTACVSSQVGCPLRC
SFCATGKGGFSRNLKRHEIIEQVLAIEDVFKHRVTNVVFMGMGEPMLNLKSVLDAHRCLN
KDIEIGQRMITISTVGVPNTIKKLASHKLQSTLAVSLHAPNQSLREKIVPSAKAYPLEAI
MQDCRDYFQETNRRVSFEYALLAGVNDSVENAVELAELLREWGKTYHVNLIPYNPIEGSE
YKRPFKKAVLAFAAALESRKITASVRQTRGLEANAACGQLRNKFQKSPLLAETDGQDSKP
DAAEAVSC
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacaacgaccaatacgattgctatgcttcataacctcgtcttctctgtcccc
atctctcgcatggtcgtgcgccgttactccctctccacaaccgccgccgccgccgcaatc
tccacgaccgccacaacctccgtaaatcctccgaaaccggtgcgtactccgcacgtggac
tcgcaggtactcctgggaatgtcggagccggagcttcaacagctcgctatcaaactcggt
caagaaggatacagagggaagcagctccatcatctcatctacaagaggaaggctaaacaa
gtcgaagactttagcaacttgccgcagacgtttcgaaaggagcttgtggagagtgggtat
aaggtgggaagatcacccatttaccaaactgtcactgccactgatggtaccattaagctg
ctgttgaagcttgaagataacctgttgatcgaaactgttggtataccggtccaggaagag
aaaggcataacgcgtctcactgcttgtgtctcttcccaggttggatgtccattgcgctgc
tcgttttgtgctacggggaaaggaggattttcaagaaatcttaagagacatgaaatcatt
gagcaggtgttggctatagaggatgtgttcaagcacagagtgacaaatgtggttttcatg
ggaatgggtgaacccatgttgaacctaaagtcagtacttgatgctcatcgctgtttaaac
aaggacattgaaatcgggcaaagaatgattacaatatcaacagttggtgttccaaacaca
atcaagaagcttgcctctcataagcttcagtccactttagctgtcagcttacatgctcca
aaccagagtctccgggagaaaatagtaccaagtgccaaggcttatccgctggaagcaatt
atgcaagattgtcgtgattactttcaagaaacaaatagacgagtctccttcgagtatgcc
cttctagctggagtcaatgattcagttgagaacgcggtggaactcgcagagctactacgt
gaatggggcaaaacttatcacgttaacttgataccttacaaccctatagaaggatcagag
tacaagcgacctttcaagaaagcggtcctggcctttgcggctgcattggagtcgcgtaag
ataacagcaagcgtgaggcaaacaagagggcttgaagcgaatgctgcttgtggtcagctg
aggaataagttccagaaaagtcctttactcgctgagacggatggtcaagactctaagcca
gatgcagcagaagctgtttcgtgttag
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