Raphanus sativus (radish): 108806639
Help
Entry
108806639 CDS
T06014
Name
(RefSeq) gamma-aminobutyrate transaminase POP2, mitochondrial isoform X1
KO
K16871
4-aminobutyrate---pyruvate transaminase [EC:
2.6.1.96
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00250
Alanine, aspartate and glutamate metabolism
rsz00650
Butanoate metabolism
rsz01100
Metabolic pathways
Module
rsz_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
108806639
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
108806639
Enzymes [BR:
rsz01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.96 4-aminobutyrate---pyruvate transaminase
108806639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Motif
Other DBs
NCBI-GeneID:
108806639
NCBI-ProteinID:
XP_056845048
UniProt:
A0A6J0LQ57
LinkDB
All DBs
Position
6:7850358..7854029
Genome browser
AA seq
502 aa
AA seq
DB search
MAVINSLRRMARSSQVTLQSRYAASQYTSGSRIFTTEASPQKQTIVGSKGHDMLAPFTAG
WQSADLHPLIIAKSEGSYVYDDHGKKYLDSLAGLWCTALGGNEPRLVSAAVEQLKTLPFY
HSFWNRTTKPSLDLAKDLLDMFTANKMAKAFFTNSGSEANDTQVKLVWYYNNALGRPEKK
KFIARKKSYHGSTLISASLSGLPALHQNFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTR
LAKNLEDLIIKEGPETIGAFIAEPVMGAGGVIPPPATYFEKIQAVVKKYDILFIADEVIC
AFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAILMSQEVADVIYSQSNKLGAFSHG
FTYSGHPVSCAVAIEALKIYKERNTPEHVATVAPRFQDGLKAFAKTSPIIGEIRGTGLIL
GTEFTDNKSPNEPFPPEWGVGAYFGAECQKRGMLVRVAGDSIMMSPPLIISPEEIDELIT
IYGEALKATEERVKELKTQQKK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccgtaatcaacagcctccgtcggatggctcgttcctctcaggttactttgcagagc
aggtatgctgcttcacaatacacgtctggttcgaggatctttactacagaggcttcacct
cagaagcaaacgatagttgggtctaaagggcatgatatgctggcaccttttacagctggg
tggcagagtgctgatttacatcccttgatcattgctaaatccgagggaagttatgtgtat
gatgaccatggcaaaaagtatcttgattctctcgctggtctttggtgtactgccttggga
ggaaatgagccacggcttgtttctgctgccgtggagcagttgaaaaccttgcccttttat
cactccttctggaaccgtactactaagccttctctggatcttgccaaggatcttctagac
atgttcactgctaacaaaatggctaaagctttttttacaaacagtggatcagaggccaat
gatacccaggtcaagcttgtttggtactacaataacgcacttgggaggcctgagaagaaa
aagtttatcgcaagaaagaaatcgtaccatggctccactctaatatcagcaagtttgtct
ggccttccagctctgcaccaaaactttgatttaccagcaccatttgtgctacacacagat
tgccctcactactggcgttttcatcttccaggtgaaacggaagaggagttctcaaccaga
ttagccaagaatttggaggatctcatcattaaagagggaccagaaacaattggtgctttt
atcgctgaaccagtcatgggtgctggtggtgtgatacctccacctgctacctactttgaa
aagattcaagctgttgttaagaagtatgatatcctgttcatcgcggatgaagtcatatgt
gcattcggaagactcgggaccatgtttggctgtgacaaatacaacatcaagccagatctt
gtgtccttagctaaggcattgtcttcagcatatatgccgattggagccattcttatgagt
caagaagtagcagatgtcatttattctcaaagcaacaagctaggtgctttctcgcatgga
tttacttattctggtcatccagtttcatgtgctgtagcaattgaagcgttaaagatatac
aaagaaaggaacacgccagagcacgttgccacagttgccccaaggtttcaagatggtctt
aaagcctttgccaagactagtcctattattggagagataagaggaacgggtttgattctt
gggactgagtttactgacaacaaatcaccaaacgaaccatttccaccagaatggggtgtt
ggcgcatactttggagccgagtgccagaagcgtgggatgttagtccgcgttgcaggagat
agcataatgatgtctccaccgctcattatctcacctgaagagatcgatgagttgataact
atctacggggaagcactgaaagctacagaagagagggtaaaagaactcaagactcagcaa
aagaagtga
DBGET
integrated database retrieval system
