Raphanus sativus (radish): 108806855
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Entry
108806855 CDS
T06014
Name
(RefSeq) heat stress transcription factor A-1e
KO
K09419
heat shock transcription factor, other eukaryote
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108806855
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
108806855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Laa1_Sip1_HTR5
Zwint
ZapG-like
DARPP-32
Motif
Other DBs
NCBI-GeneID:
108806855
NCBI-ProteinID:
XP_018434561
UniProt:
A0A6J0JG04
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MGSIPESVPTANSSTTTTVVMSSIPPFLSKTYDMVDDPSTDEVVSWSSGSNSFVVWNVPE
FSKQFLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLKGQKQLLKSIIRRKPTQ
VQPPQQPQVQHSSVGACVEVGKFGLEEEVERLQRDKNVLMQELVRLRQQQQVTEHHLQHV
GQKVHVMEQRQQQMMSFLAKAVQSPGFLNQFAQQSNNEGNQQHISETNKKRRLPVEDQKN
SGSNGLNGLSRQIVRYQSSMNESANSMLQQIHNMSNNNNHGGFLLGDVPNPNLSDNGSSS
NGPSGVAFADVSSNPAMTHHNSPCATNQVLEETNLPYPQADLLVPNQGSGSPSPDVVGCE
TDNGECLDPIMAVLDGSMMLETDNELLPGGVQDSLWEQFFGESSGIGDSDELVSGSVENE
LIMEQLELQPNLRNVLSNNQQMNHLTEQMGLLTSDALRK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgattcccgaatctgtacctacggcgaactcttctacgacgacgacggtggtg
atgagctctattccgccgtttctgagcaagacttacgacatggttgacgatccatcgact
gatgaggtggtgtcttggagcagtggtagcaacagctttgtcgtgtggaacgtgcccgag
ttctccaaacagtttctgcccaagtacttcaaacacaacaacttctctagcttcgtcaga
cagctcaacacttatggtttcagaaaagttgatccagaccgttgggaatttgcaaacgag
ggatttctaaaaggccaaaaacaattgctaaagagcatcatccggagaaagcctactcag
gtgcagcctccacagcagccacaagttcagcactcctccgttggtgcctgcgtggaagtg
gggaagttcggactcgaagaagaagtggaaagactccagcgggacaagaacgtcctcatg
caagagctcgtgaggttaagacagcagcagcaagtcaccgaacatcatcttcagcacgtg
gggcagaaagttcatgtgatggagcagaggcagcagcagatgatgtctttcctagcaaag
gctgttcagagtccaggcttcttaaaccagtttgcacaacagagtaataatgagggaaac
caacaacacatctccgagaccaacaagaagagaaggctacctgttgaggaccagaagaat
agtggtagtaacgggcttaatggtcttagccgccagattgtgaggtaccagtcatcgatg
aacgaatcagcaaacagtatgctccaacagatacacaatatgagtaacaacaacaatcac
ggtggctttcttttgggagatgttcctaatcctaacctctcagacaatggaagctcctca
aacggaccgtctggagttgcattcgctgatgtttcatctaatcctgcaatgacacatcac
aacagcccttgtgcaacaaaccaagtccttgaggagaccaatttgccttatcctcaagct
gatctgttagttccaaaccaaggttctgggagcccaagtccggatgtagttggatgcgag
actgataacggagagtgtctggatccaataatggcggttttggatggctcaatgatgtta
gaaaccgataatgagttgcttcctggaggagtacaagattctttgtgggaacagttcttt
ggtgagagctcagggattggggactcagatgagctagtctcagggtcggtggagaatgag
ttgataatggagcagctggagttacaacccaacctgaggaatgtgttgagcaacaatcag
caaatgaaccatctcactgaacagatgggacttctcacatcagatgcgctcaggaaataa
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