KEGG   Raphanus sativus (radish): 108806864
Entry
108806864         CDS       T06014                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-1
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03010  Ribosome
rsz04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    108806864
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108806864
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:rsz03011]
    108806864
   04121 Ubiquitin system [BR:rsz04121]
    108806864
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsz04147]
    108806864
Ribosome [BR:rsz03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    108806864
  Archaea
    108806864
Ubiquitin system [BR:rsz04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   108806864
Exosome [BR:rsz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108806864
  Exosomal proteins of colorectal cancer cells
   108806864
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD TBK1_ULD UBL_UBAC1 DUF2604 Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 108806864
NCBI-ProteinID: XP_018434570
UniProt: A0A6J0JG25
LinkDB
Position
6:35221652..35222232
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGTGKVQRLRKE
CPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKPDEE
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaaaaccctaacggggaagacgataaccctagaggtcgaatcatcc
gacacgatcgacaatgtcaaggccaagattcaggacaaggaagggatcccaccggaccag
cagcgtctgatcttcgccgggaagcagctcgaagacgggaggacgctcgcggactacaac
atccagaaggagtcgacgcttcacttggtgctccgcctgagaggaggagcgaagaagagg
aagaagaagacgtacacgaagccgaagaagatcaagcacaagcacaagaaggtgaagctc
gcggttctgcagttttacaaggttgatgggacagggaaggttcagaggctgaggaaagag
tgtccttcggttagttgtggtccgggaactttcatggcgagtcatttcgataggcattac
tgtggcaagtgtggaaccacttatgtcttcaagaagcctgatgaagagtga

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