Raphanus sativus (radish): 108806877
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Entry
108806877 CDS
T06014
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108806877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108806877
Spliceosome [BR:
rsz03041
]
Complex C
Other components
Step II factors
108806877
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
BLOC1S3
Tudor_3
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
108806877
NCBI-ProteinID:
XP_056844589
UniProt:
A0A9W3BZC2
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All DBs
Position
6:8492885..8495816
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AA seq
536 aa
AA seq
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MATASVGFKSREEHRKKQELEEARKAGLAPAEIDEEGKEINPHIPQYMSSAPWYLNADKP
SLKHQRKWKVDPNYTKSWYDRGAKTFKADKYRKGACENCGAMTHKTKLCTERPRKMGAKW
TNKNIAPDEKIETFDLDYDGKRDRWNGYDTAKYSVVIKRYEARDEARRNFLKEQQLKKLD
KKRNKKSDEEESSDEEEALKLDEAKADESKQMDFAKVEKRVRTTGGGSTGTVRNLRIRED
TAKYLLNLDVNSAYYDPKTRSMREDPLPNADPNEKFYAGDNQYRMSGEALEFKKLNIHAL
QLSEKGQEEVNMQAAPSQAELLFKKYKEAKEKLKKQIQETITEKYGNAAASVEDIPKELL
FGQSEREIEYDRCGRVIKGMEVPVPKSKYEEDVYLNNHTSVWGSWWKDQQWGYRCCQQTV
KNSYCTGVAGIDAAEEAAGLMRTNIERHATASNDRSGLVEEKRFVTWGSDTPEDLVLDRE
KLDEALKKEDERKREEKDERKRKYNVQWNDQVTPEEMEAYRMKRMHEDDPMKNLLH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcatcagttgggtttaagtcaagagaagagcaccgtaagaagcaagaattg
gaggaagcgcgtaaagcagggcttgctccagcagagatcgatgaggaaggaaaagagatt
aatcctcacattcctcaatacatgtcttctgctccttggtacctcaatgcagacaagcct
agcttgaaacatcaaaggaaatggaaagttgatcctaactatacaaagtcgtggtacgat
agaggagccaaaacgttcaaggcagataagtataggaaaggagcttgtgagaactgtggg
gctatgacgcataagacaaagttgtgcacggagaggccaagaaagatgggagcgaagtgg
actaacaagaacatagctcctgatgaaaagatcgagacgttcgaccttgattacgatggg
aaaagggatagatggaacggttacgatactgccaaatattcggtagtgatcaagaggtat
gaggctagagatgaagcgagaaggaactttttaaaagagcagcagttgaagaagctggac
aagaaacgtaacaaaaagagtgatgaagaagagtctagtgacgaagaggaagccctgaaa
cttgatgaagccaaagctgatgagagcaagcaaatggattttgctaaggtagagaaacgt
gttcgtactactggtggaggcagtacaggaactgttaggaacttgcgtatacgtgaagac
actgcaaagtatcttttgaatcttgatgtcaactctgcttattatgatcccaagacgagg
tctatgcgtgaagatcctcttccaaatgctgatccgaacgagaagttctatgcgggagac
aatcaatacagaatgagtggagaagctctagagttcaagaagcttaatattcacgcgttg
caattatccgagaaaggccaggaagaggtcaacatgcaagctgctccttctcaagcagag
ctgcttttcaagaaatacaaagaagcgaaagagaaactgaagaaacagatccaagaaaca
atcacggagaagtatggaaatgctgctgcgtctgtggaagacatcccaaaggagctttta
tttggacaaagcgagagagaaatcgaatatgaccgatgtggaagagttattaaaggaatg
gaagtgccggtacctaagagcaaatatgaagaagatgtttacttaaacaaccacacaagt
gtatgggggtcgtggtggaaggatcaacagtggggttacagatgttgtcagcaaacagtt
aagaacagctattgcactggtgttgcggggatagatgcggctgaggaagctgcaggtcta
atgagaaccaatatcgaaagacatgctacagcttctaatgataggtccggtctagtagag
gagaaaagatttgtgacttggggaagtgatacaccagaagatcttgttcttgaccgtgaa
aaacttgatgaagctttaaagaaggaggatgagaggaagagagaggagaaagatgaaagg
aaacgtaaatacaatgtccaatggaatgatcaggttacacctgaggagatggaagcttac
cgaatgaaaagaatgcatgaggatgatcccatgaagaatcttttgcactag
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