KEGG   Raphanus sativus (radish): 108806879
Entry
108806879         CDS       T06014                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rsz03036]
    108806879
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108806879
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    108806879
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108806879
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ HEAT_2 TOR1L1_N
Other DBs
NCBI-GeneID: 108806879
NCBI-ProteinID: XP_018434589
UniProt: A0A6J0JIC2
LinkDB
Position
Unknown
AA seq 1134 aa
MGSLNNLTEHLETFVDVTRSPTHHAESLKAIASSLEKGVLSINQLVVEMDMYLTTTDDVV
RARGILLLAEILNHLKSKPLDNAVVHSLIAFFTSKLEEWRSLRGALTGCLALLKRKGVAG
VVTATDAEAVAKSMAQNVQVQSFALHDRKLCFELWECLVEQYPEAMINLGNLIVFATCEA
IDGEKDPPCLMVAFHVVELLARLFPSPSGPVASEASDLFEFISCYFPLHYTHTKGDEASI
PREDLSRGLSLAISSTPFFEPYAIPLLLEKLSSSLPVAKVDSLKCLKDCAVKYGVHRMKK
HYEGLWSALKDALYSSPGRDLSFGPEFLTSPGFEMDEIHREAADLLQRLVKQDISFLGLV
VDDIRVNMVFDTISRYSRYEEMPDTSKLEVLVVSQILSVSARASVDSCNIIFQTFFFRLM
NTLGIVETTSTGDLVHKENSTVSTRLYHGGLHLCIELLTASKDLIPSSEESSSTPGSAQQ
SWCSIVNRFSVPLIGAFTSAVQSSNDDCSADAYLGVKGLLAMGMFRGGSSPVSRSEFEKI
LTTLTSIITAESAKTVKWELALKALVCMGSFIDQYRESEKAMSYMGIVVENLVSLVRSSQ
CSLPYPLILEATSEVCSTRPKYVEKMVQGFEEAFCSSFSDFYANGNFKSIENCSQLLECV
TNKLLPRVTEIDGLEKSLVHFAISMWNEIESSFVFSYDFNGREFVEAAMKTMGQIVGVAL
VDSQNSIIQKAYNVISSSTLPAMESIPLTFAALEGLQRDLSTRDELTLSLFASVIIGVSP
KASIPDVKPLIKLFMVSFLKGYIPAAQALGSMVNKLGTGSGGANISTDCSLEEACEIIFH
ESFASGNTISSDDSSKSKCGSETLLSKICLGFYGSLDLQTRAITGLAWIGKGLLMRGDGR
VNEIALVLMECLKSSNSSGNAMHPSAMKHAADAFLILMSDSGECLNRKFHAVIRPLYKQR
FFSITVPILESLIVNCQTPLSRTMLHVALAHVISNVPVTVILDNTKKLLPMILEGLSVLS
VDAVDKETLFSLLLVLSGTLTDTKGKQSVSDNAHRIIECLVKLTAYPHLMVVRETAIQCL
ATLLELPHGRIYPFRREVLQAVTKALDDPKRRVREEAIKCRQAWTSITSRSTPV
NT seq 3405 nt   +upstreamnt  +downstreamnt
atgggatcactgaataatctcactgagcatctcgaaactttcgttgacgtcactcgttct
cctactcaccatgctgagagtttgaaagctattgcttcttccttggagaagggtgtcttg
tctattaaccaattggtcgtggagatggacatgtatttgacgaccactgatgatgttgtc
cgagcacgaggtattctcctgcttgcggagatcctgaaccatctaaagtcaaagcctttg
gacaatgcagttgtccatagtctcattgctttctttacatcaaagctggaagagtggaga
tcgttgcggggtgcacttactggttgcttggctctgcttaagaggaaaggcgtagctggt
gtggtcactgctactgatgcagaagctgtggcgaagtcaatggcacagaatgttcaagtt
cagtctttcgcacttcatgatcgcaagctctgttttgaactatgggagtgccttgtagag
caataccctgaagctatgataaatttgggcaatttgattgtttttgctacatgcgaagcc
atcgatggagaaaaagaccctccatgcttaatggtagcttttcatgtagtggagcttttg
gctcgattgttccccagtccctccggtccagttgcctccgaggcatctgatctttttgag
tttataagttgctacttcccacttcattatacccatacaaaaggtgatgaagctagtatt
ccaagagaagacctctcaaggggactatccctagcaatctcctcgacgcctttttttgaa
ccgtatgctattccattgcttcttgaaaagctttcatcttctctacctgtcgcaaaggtt
gattctttgaaatgtctgaaagattgcgctgtgaaatatggagtacaccgaatgaagaag
cactatgaaggcctttggtccgctttaaaagatgcactttactcttctcctgggagagat
ttgtcctttggtccagaattcctcactagtccagggtttgaaatggatgagatccacaga
gaagctgctgatcttcttcagaggcttgttaagcaagatatctcgtttttaggtttagtt
gtggatgatatacgtgtcaacatggtctttgatactatttctagatactcgcggtatgaa
gaaatgcctgacacgagcaaactggaggttcttgttgtcagtcagatactgtcagtgtct
gccagagcttctgtcgactcgtgcaatataatctttcaaaccttcttcttccgccttatg
aatactctagggatcgtagagacaacgtcaactggtgatcttgttcacaaggaaaactcg
acagtttctactagactctaccatggaggtcttcatctttgcattgaacttcttacagca
tcaaaagatcttattccgagttccgaggaatcttcttcaacgcctggatccgcgcagcaa
tcttggtgttctatagttaacaggttctcagttccactgatcggggcgttcacttctgca
gtacaaagctctaatgatgattgtagtgcagatgcatatcttggagttaagggtttgctg
gctatgggtatgttccggggcggctcttctcctgtatcaagatctgaattcgagaagatt
ttgacgaccttaacatcaatcatcacagctgagagtgccaaaacagtgaagtgggaattg
gcattgaaagcgctggtctgcatgggttcatttattgatcagtatcgcgagagcgaaaag
gctatgagctacatgggtatagttgttgaaaatttggtctcgctggtccgctctagtcaa
tgcagtcttccgtatccattgatattagaagcaacatcagaagtttgctctactaggcca
aagtatgtagagaaaatggttcaaggatttgaagaagctttctgttccagtttctctgat
ttctatgccaatggaaatttcaagtcgatcgaaaattgttctcagctcctggagtgtgtg
accaataaattgcttccacgtgtgacagagatcgatggtctcgagaaaagcttggtgcat
tttgctatcagtatgtggaatgaaattgaatcctcttttgttttcagttatgattttaat
ggcagggagtttgttgaggcagcaatgaaaacaatggggcaaattgtaggagttgctttg
gtagactcacagaatagtataatccaaaaagcttataatgtgatctcatcaagcacgctt
ccagctatggagtctattcctctgacctttgctgcattagagggtttacaacgtgacctg
tccaccagggatgaattgacactctcactatttgcatcagttatcataggtgtatctccc
aaggcatccattccagatgtgaaaccacttataaagctgtttatggtgtcctttctcaag
ggttatatcccagcagctcaagctttgggttcaatggttaacaaactggggacgggttct
ggtggagcaaatatctcaaccgattgttccttggaagaagcatgtgagataatattccac
gagagttttgcatctggaaacactatttcttcagatgactctagtaaaagtaaatgtgga
agtgagacacttttgtcaaagatatgtttaggcttctatggttcgctggaccttcaaacc
cgtgctataacaggtctagcgtggattgggaaaggtttactcatgaggggtgatggaaga
gttaatgagatagctctggtactaatggaatgcttaaaatccagtaacagttccgggaat
gctatgcatccttctgccatgaaacatgcagctgatgcgttcctcatactaatgtctgat
tcgggagagtgtctgaacagaaagtttcatgcagttataaggccactctataagcaacgg
ttcttctctataacagttcccattttggagtcgctgattgtgaattgccagactccactc
tcgagaacaatgttgcatgtcgctctcgcgcatgttatatccaatgttcctgttacggtc
atattggacaataccaaaaagctactcccaatgatactggaaggcttgtctgtcttaagc
gttgacgctgtggataaagaaactctattcagtctattactggttttatctggaacgctt
actgatactaaaggaaaacaatcagtcagtgataatgcacacagaatcatcgagtgcctg
gtcaagcttacagcatacccacatctaatggtggttagggagacggcgattcagtgtctt
gctaccctgttggaattgccccatggaagaatctatcctttcagaagagaggtattacaa
gcagtaacaaaggcacttgatgatccaaaacggagagttcgggaagaagcgattaaatgc
aggcaggcttggacgtcgatcacatccagaagtacccctgtctga

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