Raphanus sativus (radish): 108806904
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Entry
108806904 CDS
T06014
Name
(RefSeq) transcription factor FAMA
KO
K26213
transcription factor FAMA
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108806904
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108806904
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
108806904
NCBI-ProteinID:
XP_018434615
UniProt:
A0A6J0JG67
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Position
6:9101044..9103421
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AA seq
401 aa
AA seq
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MAMDKEYSAPNFLGESSGGKDDTSDGMIDYMFNRNLQQEKQSMPQQHQLSPSGFGATPTF
DKMSFADVMQFADFGPKLALNQTRNQDDQDTGQGMDPVYFLKFPVLNDKIEDHNQTHHLM
SQEAGECEGNIGNLFLEEKENQEDENDNNSVQLRFIGGEEEEDDRENKNVTTKEVKSKRK
RARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEF
VRELEQLLQCLESQKRRRILGETGNRHLGDMTTTTTTSSPITSVNNPLIITGNVTESEGG
GGLQEETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITT
MEQTVLYSFNVKITSETRFTAEDIASSIQEIFTFIHANTTM
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggataaagaatactccgcaccaaatttcttaggtgaatcctcaggcggtaag
gatgataccagcgatggtatgatagactacatgttcaacagaaaccttcagcaagaaaag
caatcgatgccgcaacagcatcaactgtctccttctggattcggagcaacgccaactttt
gataaaatgagctttgcagacgtgatgcagtttgcggacttcggtccgaaactggcgttg
aaccagaccagaaatcaagacgatcaagacaccgggcaggggatggacccggtttatttc
ttaaagttcccagtcttgaacgataagatcgaggatcacaaccaaactcatcatctcatg
tctcaagaagcaggtgagtgtgaaggaaacatagggaatctgtttcttgaagaaaaggag
aaccaagaagatgaaaacgacaacaactccgtgcagctccgttttattggaggagaagaa
gaagaagacgatagagagaacaaaaatgttacgacaaaggaggtaaagagcaagaggaag
agagctagaacaagcaaaaccagcgaagaggtggaaagccaaagaatgactcatatcgcg
gtcgagaggaaccgtaggaagcaaatgaacgagcatcttcgtgtactcaggtctctcatg
cctggttcctacgtccaaaggggagatcaagcgtcgatcattggaggagcaatagagttt
gtacgagagcttgagcaactcctacaatgtctggaatcacagaagcgtcggagaatcttg
ggagaaactggtaataggcatcttggggacatgaccacgacaacgactacttcttctccc
ataacttcggttaataatcccctgattattaccggaaatgtaaccgagtcagagggtgga
ggaggacttcaggaggagacggcagagaataagtcgtgtttggctgatgtagaggtgaag
ctgctagggtttgacgccatgatcaagatactttcaagaagaagaccaggacaactgatt
aagactatagctgctttggaggatcttcatctctctatccttcacaccaacatcactacc
atggaacaaaccgtcctctactccttcaatgtcaagattacaagcgagacaaggtttacg
gcagaagacattgcaagttcgatccaggagatatttacttttattcatgcaaataccacc
atgtaa
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