Raphanus sativus (radish): 108806926
Help
Entry
108806926 CDS
T06014
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108806926
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108806926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
108806926
NCBI-ProteinID:
XP_018434643
UniProt:
A0A6J0JG94
LinkDB
All DBs
Position
6:complement(18796691..18803008)
Genome browser
AA seq
576 aa
AA seq
DB search
MAASSSSSASFFGVREDDQSHLLPLNPPATVPPPPHHQPLQSQQPLEAPPQKKKRNQPRT
PNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRK
VYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCG
TKEYRCDCGTLFSRRDSFITHRAFCDALAQESARHPTSLTSLPSHHFPYGQNTNTNSNNN
TSSMMLGLSHTGAPQNLDHRSGDALRLGGGVGGGAASRSSSDLIAANASGYFVQDQNPSF
HDQQQGFLAASNNIKPSPMNFQQSLMQFSHDSHNFPSSNLFNLSFLSGNSGVTSATRNSN
AAAVSSGNHMISNHFDGENAIGGGEGSTGLFPNNLISSADRTSSGAVPSLFGSSIQNPNS
TPHMSATALLQKAAQMGSTSSSNNNNNNSNNASSILRSFGSGMYGENESNLYDLMNSFSN
PGPTGNNASGVHSPFGSYGGVNKGSNADKQSMTRDFLGVGQIVRSMSGSGGFQQQHGNSR
ERVGSSSDSVDRNSTNLNPGGGPATSPPYGIHHASC
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcttcatcctctagtgcttccttctttggagttcgagaagatgatcaatct
caccttcttcctctgaatccccccgccaccgtccctcctcctcctcaccaccagccactg
cagtctcagcaaccccttgaagctccaccacagaaaaagaagagaaaccaaccaagaact
ccaaattccgatgcagaagtgatagctttatctccaaagacactaatggctacaaataga
ttcatatgtgaagtatgcaacaaaggttttcaaagagaacagaatctacaacttcaccga
agaggacacaatctcccatggaaacttaagcagaagtcgaccaaagaagtgaagaggaaa
gtgtatctttgtccggagcccacgtgtgtccaccatgatccgtcacgtgctctcggagac
ctcaccggaatcaagaaacattattaccgtaaacacggcgaaaagaagtggaaatgcgag
aaatgttctaagcgttacgctgttcaatcggattggaaagctcactcaaagacttgtggt
accaaagaatatcgttgcgactgtggtacactcttctcccggcgagatagtttcattaca
catagagccttctgtgacgcgttggctcaagagagtgcgagacacccaacttctttgact
tctttaccaagtcatcacttcccgtacggacaaaacaccaacaccaactccaacaacaac
acttcaagcatgatgcttggtttgtcccacacgggggccccacagaatcttgatcatcgc
tctggcgacgctctccgacttggaggaggagtaggtggaggagccgcctcacgctcttca
tctgatctgattgctgcaaatgcttcaggttacttcgtgcaagaccaaaaccctagcttt
catgatcaacaacaaggatttttggctgcaagcaataacatcaagccatcaccaatgaat
tttcaacagagtctgatgcagttctcgcatgatagccataactttccttcctccaatctc
ttcaatctcagtttcctctctggaaacagcggagttacttctgctacaagaaactctaat
gctgctgctgtttcttcgggtaatcatatgatctcgaaccattttgatggcgaaaatgct
attggaggcggagaaggaagcacgggcctcttccctaacaatctgattagctcggcggac
agaaccagctcaggagcagtgccttccctctttggctcatcaattcaaaatcccaattca
acacctcacatgtcagccactgctcttcttcaaaaagctgctcaaatgggttcaacctca
agcagcaacaacaacaacaataatagtaacaatgcctcatccattctaagaagctttggg
agtggaatgtacggagaaaacgagagtaatctttatgatttgatgaactctttctctaac
cccggtccaacgggaaacaacgctagtggagtacattctccgtttggttcgtacggagga
gtgaacaaaggttcgaacgctgataaacaaagcatgactagagactttcttggagttgga
cagatcgtaagaagcatgagtggaagtggagggtttcaacaacagcatggcaatagtaga
gaaagagttggctcttcgtccgattctgtcgatagaaacagcacgaatttgaatcctggt
ggtggtccggcaacttcaccaccgtatggaatccatcatgctagttgctag
DBGET
integrated database retrieval system
