Raphanus sativus (radish): 108806932
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Entry
108806932 CDS
T06014
Name
(RefSeq) syntaxin-43 isoform X1
KO
K08489
syntaxin 16
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108806932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108806932
Membrane trafficking [BR:
rsz04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
108806932
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Prominin
Syntaxin_2
MCPsignal
Lips
Helicase_dom
Motif
Other DBs
NCBI-GeneID:
108806932
NCBI-ProteinID:
XP_018434649
UniProt:
A0A6J0JII3
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Position
6:complement(2237661..2240141)
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AA seq
318 aa
AA seq
DB search
MATRNRTLLFRKYRNSLRSVRAPMTDSKSGVGPVIEMASSSLLHPKRSYAPVSTEDPGSS
SRGGAVTVGLPPDWVDVSEEISVNIQRARTKMAELGKAHAKALMPTFGDGKEDQHQIESL
TQEITFLLRKSEKQLQKLSAAGPSEDSNVRKNVQRSLATDLQFLSMELRKKQSTYLKRLR
LQKEDGGDLEMNLNGSSSRADDDDFDDILFSEHQMSKIKKSEAISVEREKEIQQVVESVN
ELAQIMKDLSALVIDQGTIVDRIDYNIQNVASTVEDGLKQLQKAERTQRNGGMVMCASVL
VILCFIMIVLLILKEIFL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaggaatcgtacgctcttgttccgcaagtacaggaactctctgaggagcgtc
cgcgctccgatgacggattcgaaatccggcgtaggtcccgtgatcgagatggcgagctcg
tctctgttgcatcccaaacgatcgtatgctccggtcagtaccgaagatccagggagttcg
agtagaggaggagcagtaacagtgggattaccaccagattgggttgatgtctctgaggag
atttcagtgaacattcagcgtgcgaggactaaaatggctgaactcgggaaggctcatgcg
aaagccttgatgcctacgtttggtgatggtaaagaagatcagcatcagatcgagtctttg
acgcaggagattactttcctgttgaggaaatcagagaagcagcttcagaagctatctgca
gctggaccttctgaagattcaaatgtcaggaaaaacgtgcagagatctcttgctactgat
ctccaattcctttctatggagctccgcaagaagcagtctacatatctgaaacgcttgaga
ctacaaaaagaggatggaggggatttagagatgaatctcaatggaagcagctctagagca
gatgatgatgacttcgatgatatattatttagtgagcatcagatgagcaagatcaaaaag
agcgaggcaatatccgtagagagggagaaagagattcagcaggttgttgaatctgtaaac
gagctcgctcagataatgaaggatctttctgcacttgtaattgaccagggtacgatagtt
gatcggatcgactataacatccaaaacgttgctagtacagttgaagatggtctcaaacag
ctgcaaaaggcagaacgtacacagagaaatggaggtatggttatgtgtgcgtctgttctt
gttattctctgcttcatcatgatagtactcttaatccttaaagagattttcttgtga
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integrated database retrieval system
