Raphanus sativus (radish): 108807123
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Entry
108807123 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108807123
Enzymes [BR:
rsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108807123
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
90S particles
Helicases
108807123
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
DUF5732
P-loop_SecA
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
108807123
NCBI-ProteinID:
XP_056854298
UniProt:
A0A9W3CSC9
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MEKSVNFLFGGTNFNRKKFAPDFAKFKNRKEEDEMSQQETELLEEEEEEPEQEKAVSSSS
KKRKRKSANSGFDVFKSSKKSRSNKGKEVEQETKDETLENPKKELYRQIEVEMLVSRKQY
NIHVSGNNIPAPLKSFTELSSRYGCKKYILRNLAGLDFREPTPIQRQAIPVLLSGRECFA
CAPTGSGKTFAFICPMLIKLKRHSTDGIRAVILSPARELAAQTAREGKKLIKGSKFNIRL
MTKPXAKTADFSKLQCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSMLKQI
DGVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASKTVKQKLXFAGT
EEGKLLALRQSFAQSLNPPVLIFVQSKERAKELYDELKCDXIRVGVIHSDLPAGERENAV
DSFRAGETWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITF
YTEEDMPFLRNIANTMTSSGCEVPSWIMTLKKKKWKKHRPKRDAISTRPKESKIEQEE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaagcgtgaattttctgttcggtggaacgaacttcaacaggaagaagtttgct
ccagatttcgccaagtttaagaatcgcaaggaggaggatgagatgtcacaacaagaaact
gagcttcttgaggaggaagaagaggagcctgagcaagagaaggcagtttcctcctcctct
aagaagagaaaacgaaaatctgctaattccggattcgatgtgttcaagagctcaaagaag
tcacgttccaacaagggaaaagaagttgaacaagagacaaaggacgagactttagaaaat
cccaagaaggagctttaccggcaaatagaggtcgagatgcttgtgtcgaggaaacagtac
aacattcatgtttctggtaacaacattccagccccacttaaaagcttcacagagttgtca
tccaggtatggttgtaagaaatacatattacgcaatttggctggacttgattttagagag
cctactccaatccagaggcaggctattccagttctcctatcgggtcgtgaatgttttgcc
tgtgctccaactgggtcaggaaagacctttgcttttatttgccccatgcttataaaactc
aagcgccattccactgatggtataagagcagtcatcctctctcctgcacgagagctagct
gctcaaacagctagagaagggaaaaaacttatcaaaggaagcaagttcaacatcagatta
atgactaaacccntcgccaaaactgctgatttctcgaagctgcagtgtgatgttctcata
tcaacacccatgcggcttaaacgagccatcaaggctaaaaaaatcgacttaagcaaggtg
gagtatcttgtccttgatgaatccgacaagctgtttgagcagagcatgttgaagcaaata
gacggcgtggtcaaggcttgttcaaacccttcgatcatacggtcactgttcagtgctact
ctacccgattctgttgaggagcttgcgcgttccataatgcacgatgctgttcgtgtgatc
attggccgaaagaacacagcatctaaaaccgtcaagcagaagcttngtttcgctggaact
gaagaagggaagcttctcgctcttcgccaaagctttgcacagagtctgaatccaccggta
ctgatctttgtgcaaagcaaagaacgagcaaaggaactctacgatgaactgaagtgtgat
naaatcagagtcggtgtcatccattccgatctccctgcaggagagcgagagaacgctgtt
gatagcttcagagcaggggagacgtgggttctgattgccactgatgtgatcgctagaggt
atggatttcaaagggatcaactgcgtgataaactacgacttcccggactctgcttctgca
tacatccataggattggtcgatcagggagagcgggaaggagcggtgaagcgataacgttc
tacacggaagaagatatgcctttccttaggaacatagccaacaccatgacatcgtcggga
tgtgaggttccgtcgtggatcatgactttgaagaagaagaagtggaagaagcataggcca
aaacgtgatgctatatccactcgacccaaagagagtaaaatcgaacaagaagagtaa
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