Raphanus sativus (radish): 108807245
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Entry
108807245 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108807245
04121 Ubiquitin system [BR:
rsz04121
]
108807245
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108807245
Membrane trafficking [BR:
rsz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108807245
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108807245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING_Vps41
zf-RING_16
zf-RING_10
RINGv
Prok-RING_1
zf-Nse
Motif
Other DBs
NCBI-GeneID:
108807245
NCBI-ProteinID:
XP_018435009
UniProt:
A0A6J0JJJ4
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All DBs
Position
6:6924564..6926660
Genome browser
AA seq
312 aa
AA seq
DB search
MSSGGNSTFSKMFFCHQCNRTVTISISSSADPFCPLCSGGFLEECDEPNPNPSPPPNPIG
FLPMADPFSTLLPLLFGSSSSTNPSLFGGPRSTDHPHGGGAFDPVSFLQNHLQHLQSSGT
HVQFVVEDHPFGRVPGNMGDYFFGPGLEQLIHQLAENDPNRYGTPPASKSAVDALPTVKV
TMDMLRSEMNQCAVCMDEFEEGGDVKEMPCKHVFHQGCLMPWLELHNSCPVCRFELPTDD
PDYERRGQSQGGQMSGQGSVGGQGTGRRFSVQLPWPFRSQDGSGSGSGARGSGGAGGGGG
GSNLETRQEDLD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccggtggaaactctactttctccaagatgttcttctgtcaccagtgcaaccgc
acagtcaccatctcaatctcctcctccgccgatcctttctgccctctctgctccggtggg
tttctcgaagaatgcgacgaaccaaaccctaatccatccccacccccaaaccctatcggt
ttcctcccgatggccgatcctttctccaccttactccctctcttattcggctcctcctcc
tccacgaaccccagcctcttcggtggtccacgctccaccgatcaccctcacggtggagga
gcgttcgatccggtgtcgtttctccagaaccatctccagcatctgcaatccagcggcact
cacgtccagttcgtggtggaggatcatccgtttggccgggtaccggggaacatgggggac
tacttcttcggccctggcctcgagcagctgattcaccagctcgcggagaacgaccctaac
cgttacggaactcctcctgcgtccaaatccgcggtcgacgcgcttccgacggttaaggtg
acgatggatatgttgaggtccgagatgaaccagtgtgctgtgtgtatggatgagtttgag
gaaggtggggatgtgaaggagatgccttgcaagcatgtgttccatcagggttgtttgatg
ccttggcttgagttgcataactcttgtcccgtttgtcggtttgagttgcctactgatgat
cctgattacgagcgaagggggcaaagtcaaggaggtcagatgagtgggcagggatcggtt
ggggggcaggggacggggaggaggtttagtgtacagctgccttggccgtttaggagtcag
gatggatctggttcagggtctggagcacgtggaagtggcggcgctggtggtggaggtggt
gggtctaatcttgagaccagacaggaagatttggattga
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integrated database retrieval system
