Raphanus sativus (radish): 108807322
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Entry
108807322 CDS
T06014
Name
(RefSeq) auxin response factor 6
KO
K14486
auxin response factor
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108807322
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
108807322
NCBI-ProteinID:
XP_018435097
UniProt:
A0A6J0JHJ1
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Position
1:complement(13373393..13378272)
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AA seq
901 aa
AA seq
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MRLSTAGFNPQPHEVTGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTN
KEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGV
PSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWK
FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSS
VLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRF
RMLFETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEP
LTTFPMYPSPFPLRLKRPWPPGLPSFHGLKEDDMSMGMGMSSPLMWDRGLQSLNFQGMGV
NPWMQPRLDASGMLGMQNDVYQAMAAAALQDMRGIDPAKAAASLLQFQNPSGFSMQPPSL
MQPQMLQQQLSQQQQQQQQQQQLSQQQQQSYLGVPETHQPQSQSNNLLSQQHQVVDNHNP
SASSAMSQFGSASQSATLPPQSMTSLQNFSDSNGGNNNPMSPLHTLLSNFSQDESSQLLN
LTRTNSGAMTSSGWPSKRPAVDLSSFGNNNTQSVIEQLGQSHSTSNVPPNAVSLPPFPGG
GRECSIEQEGSPSDPHSHLLFGVNIDSSSLLMPNGMSNLRSIGIEGGDSTTLPFTTSNFN
NDFSTGGNLAMTTPSSCIDEPGFLQSSENLGSENQQSNTFVKVYKSGSFGRSLDITKFSS
YHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSP
QEVQQMGKRGLELLNSAPPSSNNNVVEKLPSSNGNCDDFGNRSDPRNLGNGIASVGGSFN
Y
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgagattgtctacagctgggtttaatcctcaacctcatgaagttacaggagagaagaga
gttctaaattcggagctgtggcatgcttgtgctggtcctcttgtctcgttacctcctgtt
ggatccagagttgtgtatttccctcaaggtcacagtgaacaggtcgctgcttcgaccaac
aaagaagtggatgctcatataccaaactacccgagcttgcatcctcagcttatctgtcag
cttcacaatgtcacaatgcatgctgatgtggagactgatgaagtctacgcacaaatgact
ttacaaccgttgaacgctcaagaacaaaaagatccatacctgccggcggagttaggtgtc
cctagtagacagcctacaaactatttctgtaaaactctgactgctagtgataccagcact
catggtggtttctctgttcctcgccgagctgctgagaaagttttccctcccttggattac
tctcagcagcctccagctcaagagttgatggcgagagatctgcacgataacgaatggaag
ttcaggcatattttccgaggccaacccaagagacacctcctcactactggttggagcgta
tttgtgagtgctaaaaggcttgtcgctggtgactctgtgcttttcatctggaacgataag
aatcagttacttcttggtattagacgagccaatcgtccacagactgtcatgccttcatct
gtgttatcaagtgacagtatgcatttaggccttcttgctgctgcagctcacgcagccgct
actaatagtcgtttcaccatcttctataacccaagggcaagcccttcagagtttgtgata
cctctggctaagtacgtgaaagcggtttatcacactcgcgtctctgttggcatgcggttt
aggatgctgtttgaaaccgaggaatcaagtgttcgtcggtacatgggtacaataactggc
atttgtgatcttgatcctactcgttgggccaattctcattggcgctccgtcaaggttgga
tgggatgagtccactgcaggagagaggcaaccgagagtttccttgtgggagattgagcct
ttgacgacattccctatgtatccatctccttttcctctcaggcttaaacgtccatggcct
ccaggtctcccttcttttcatggtcttaaagaagacgatatgagtatgggtatgggaatg
agttcgccgcttatgtgggatcgtggacttcagtcactgaactttcaaggtatgggagtt
aacccgtggatgcagcctaggcttgatgcttcgggaatgcttggtatgcagaacgacgtt
taccaagcaatggctgctgctgcacttcaagacatgagaggcattgatccagctaaagct
gctgcttctcttcttcagttccaaaacccctcgggcttctcaatgcaacccccttccttg
atgcagccacagatgctccaacagcaactctctcagcagcagcagcagcagcaacaacaa
caacaactctctcaacagcagcaacagtcttatctcggggttcctgaaacccaccagcct
cagtctcagtccaacaatcttctttctcagcagcatcaagtggtggataatcataatccg
tcagcttccagtgctatgtctcagtttggttctgcttctcagtcagccacgttgccgccc
cagtccatgacttctcttcagaacttctcagacagcaacggaggaaacaacaatccaatg
tctccgctccacacacttctcagtaacttctctcaagacgagtcatctcaactgctcaac
ctcactagaacaaactctggtgcaatgacttcttccggttggccatcaaagcgtccagca
gttgatctatcatcattcggtaacaacaacactcaatccgtgattgagcaactgggacag
tctcacagcacaagcaacgtccctccaaatgctgtctcgttgcctccattccccggcggt
ggcagagagtgctcaatagagcaagaaggaagcccctcagacccacatagccatcttctc
tttggagtcaacatagattcatcttccctcttgatgccaaacggaatgtcaaaccttaga
agcatcggcattgaaggtggcgactccaccactctacctttcacaacatctaacttcaac
aacgacttctccaccggtggtaatcttgcaatgactacaccttctagttgtatagacgaa
ccaggttttctacagtcctcagaaaacctcggttctgagaaccaacaatccaataccttt
gtgaaggtgtacaagtcagggtcttttggacgatcattagatataacgaagtttagcagc
taccacgagctgcgaagcgagcttgctcgcatgtttggccttgaaggccagttagaagac
cctgtgagatcaggctggcagcttgtatttgtcgaccgagagaacgatgttcttctcctc
ggcgatgacccttggccggagtttgtgagcagcgtgtggtgcatcaagatactgtcacca
caagaagtgcagcaaatggggaaaagaggccttgagcttctcaactcagctcctccatcc
tccaacaacaacgtcgtcgagaagctcccgagcagcaacgggaactgcgatgactttggc
aaccggtcagacccgaggaacctcggtaacggtattgcatccgttgggggttcattcaac
tactag
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