Raphanus sativus (radish): 108807438
Help
Entry
108807438 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: geranylgeranyl pyrophosphate synthase 6, mitochondrial-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00900
Terpenoid backbone biosynthesis
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Module
rsz_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108807438
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rsz01006
]
108807438
Enzymes [BR:
rsz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
108807438
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
108807438
2.5.1.29 geranylgeranyl diphosphate synthase
108807438
Prenyltransferases [BR:
rsz01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
108807438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
ELH
Motif
Other DBs
NCBI-GeneID:
108807438
NCBI-ProteinID:
XP_056852072
UniProt:
A0A9W3CKN3
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MRYTAVTVPLASLSKFQHRSFSTASNSSAAAGFDFINYMASKAKSINKALNDAVPLCTTK
YQPIRTKIREAMRYSLLSNGKRVSPVLCLAACELVGGHESTAMPAACAVEMIHASSLIQD
DLPCMDDESLRRGKPTNHKICREDVAILAADAFLALAVTHTLAATSENVPPSRVSRAVFE
MXAVGTDGLVAGQAADLAGEKMVLVENDKGLKYLEFIHIHKTAALLEAPVMGCIVGGGSD
EEVERLRRYARCVGLMYQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYPRVMGVVKSREY
VEKLNREACEHLQGFDSDKVAPLLSLADYIVNRQK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcgttacactgcggtaacggttccacttgcatctttatcgaagttccaacatcgaagt
ttctctactgcctcgaactcaagtgcggctgcgggcttcgatttcatcaactatatggca
agtaaggctaaatcaatcaacaaggcactaaacgacgccgttccactctgcactaccaag
taccaacccattcgcacaaagatccgcgaggcaatgagatactccctgctctctaacggc
aaacgcgtcagtcccgtgctctgcctcgcagcttgcgagctcgtaggtggccacgaatca
accgctatgcccgccgcttgcgccgtcgagatgatccatgcatcgtcgcttatccaagac
gatcttccttgtatggacgacgaaagcctccgtcgaggaaaacccactaaccacaagata
tgccgcgaagacgtggcgatcttagccgcagacgcgtttttagctctcgccgtaacgcac
acgctggcagcaacgtctgaaaacgttcccccgtcgagggtttcgagagctgtgtttgag
atgnatgccgtcggaactgacggtctcgtggcgggtcaagcggcggatctggccggagag
aagatggttttggtggaaaacgataaaggattgaagtatcttgagtttatacatattcat
aaaacggcggcgttgctcgaagcgccggtcatgggatgtatagtgggaggtgggtctgat
gaggaggttgagagacttcgaagatatgcgagatgcgttgggttgatgtatcaggtggtg
gacgatgtgcttgatgtaacgaagtcgtcggaggagctagggaagaccgctggtaaagat
ttgatcgccgggaagctgacgtatccgagagtgatgggagtggtgaagtcgagggaatat
gtggagaagttgaacagagaagcgtgtgaacatcttcaagggttcgattcagacaaggtg
gctcctctgttgtctcttgctgattacattgtcaacagacaaaagtga
DBGET
integrated database retrieval system
