Raphanus sativus (radish): 108807458
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Entry
108807458 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC108807458
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108807458
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108807458
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108807458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf_RING_Vps8
zf-ANAPC11
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-C3HC4_4
zf-HC5HC2H
zf-RING_10
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
108807458
NCBI-ProteinID:
XP_018435250
UniProt:
A0A6J0JI03
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All DBs
Position
6:44845817..44847097
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AA seq
187 aa
AA seq
DB search
MNDFPESDIPLSFEQLLYGDDWQMSDTYPTVDANANLLPLVEMNHGGLTIEPHPISVIYP
MEETDEQWVQTQQAYGPVEIPMEEEQWLQTLMAYEPHFTYEEVMLNSEQLGDVGSGLDVN
AVIDGNLNRRRYEDRSGEAEKCVICLDELKYNDDASKLACGHDFHFECIKNXXMVKNECP
LCKQKAL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattttccggaatcagatattccattaagcttcgaacagttattatacggagat
gattggcagatgtcggacacttatccgaccgttgatgctaatgctaacttactaccactg
gttgagatgaaccatggtggtctgacaatagagcctcatccaatttcagtgatatatcca
atggaagaaacagacgagcagtgggtacagacacagcaagcctatggaccagttgaaata
ccaatggaagaagagcagtggttacagacattgatggcctatgaaccacatttcacgtat
gaggaagttatgctcaatagtgagcagctaggagatgtcggttctggtttagacgttaat
gcggtcattgatgggaatctgaaccgaagaagatatgaagatcgttctggtgaagcggag
aaatgtgtgatatgtcttgatgaacttaagtacaatgatgacgcttctaagctggcatgt
gggcatgattttcacttcgagtgtatcaagaactgataaatggtcaagaacgagtgtcct
ctttgcaagcaaaaagctctttaa
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