Raphanus sativus (radish): 108807507
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Entry
108807507 CDS
T06014
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108807507
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108807507
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108807507
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
108807507
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108807507
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108807507
Prokaryotic type
108807507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
Motif
Other DBs
NCBI-GeneID:
108807507
NCBI-ProteinID:
XP_018435299
UniProt:
A0A6J0JKC6
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Position
1:complement(6586026..6591679)
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AA seq
1112 aa
AA seq
DB search
MSLLFLRRAKPLFTSLSPSQASFFVSPSLTNLLRRSFHGSRIMSEAEKKILTEEELERKK
KKDEKAREKELKKQKAAEKAKLAELKAKQAKDGTTAPKKSSKKSSKRDAVEENPADFVDP
ETPLGERKRLSSQMAKQYSPAAVEKSWYAWWENSDFFKADAKSSKPPFVIVLPPPNVTGA
LHIGHALTSAIEDTIIRWKRMSGYNALWVPGMDHAGIATQVVVEKKLMRERGLTRHDVGR
EEFINEVWKWKNQHGSTILTQLRRLGASLDWSRECFTMDEQRSKAVTEGFVRLYKEGLIY
RDVRLVNWDCVLKTAVSDDEVEHTDIKEKTLLKVPGYEKPVEFGLLTSFAYPLEGGLGEV
VVATTRVETMLGDTAIAIHPDDARYKHLHGKFAVHPFNGRRLPIICDGILVDPNFGTGCV
KITPAHDPNDCEVGKRHNLEFINILTDDGKINTNGGSDFTGMPRFAAREAVVEALKKKGL
YRGAQNNEMRLGLCQRTSDVIEPMIKPQWYVNCGMIAKEALDVAITDENKKLEFIPKQYT
AEWRRWLENIRDWCISRQLWWGHRIPAWYATLEEDQRKEIGAYIDHWVVARTEEEARKEA
AEKFPGKKFELTQDHDVLDTWFSSGLFPLSVLGWPDETDDFKAFYPTSVLETGHDILFFW
VARMVMMGMKLGGDVPFSKVYLHPMIRDAHGRKMSKSLGNVIDPLDVINGVTLDGLHKKL
EEGNLDPKEVAVAKEGQEKDFPNGISECGTDALRFALVSYTAQSDKINLDILRVVGYRQW
CNKLWNAVRFAMMRLGDDYSPPLTLSPETMPFSCQWILSVLNKAISKTVDSLNAFEFSDA
ANTVYAWWQYQFCDVYIEAIKPYFAGDNPAFASERAHAQHALWVSLETGLRLLHPLMPFV
TEELWQRLPSPKNSERKASIMICDYPSAVENWTNEKVETEMETVLASVKCLRALRAELLE
KQKNERLPAFALCENNVTSEIVKSHELEIRTLANLSSLEVLLNGEHAAPAGSAVETVNEN
LKVYLKVDRAINTEAEQEKIKNKIDELQKQKEKLQKMMSVSGYEEKVPANIKEDNATKLA
KILQEFDFFEKESARLVAETETSGNQQVEQKK
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgctcttcctcagaagagccaagccgttatttacatctctttctccttctcag
gccagcttcttcgtctctccaagccttacaaatcttctacgtcgttcgtttcacggttcg
agaataatgtccgaagcagagaagaagatcctcacagaggaggagctcgagcgaaagaag
aagaaggatgagaaggctagagaaaaggagttgaagaagcaaaaagctgcggagaaagca
aagcttgcagaactcaaggcaaagcaggcgaaagatggaactactgcccctaaaaagagc
tcgaagaagagttccaaacgcgatgcagtcgaagagaatcctgcggattttgtggaccct
gaaactcctcttggtgagaggaaaagactctcttcacagatggctaaacagtacagtcct
gctgccgttgagaaatcatggtatgcttggtgggagaattctgacttctttaaggcggat
gctaagagttccaagccgccgtttgttattgttcttcctcctccaaatgtgactggagcc
ttgcatattggccatgccctgacatctgccattgaggatacgattattcgttggaagaga
atgtctggttataatgctctgtgggtgcccgggatggaccatgctggtatagctacacag
gttgtggttgagaaaaagcttatgcgtgaaagaggattgactaggcatgacgttggccgt
gaagaattcataaatgaagtgtggaagtggaagaaccaacatggtagcacgattctaaca
caacttcggcgtctaggagcttctcttgattggtctcgtgagtgttttacaatggacgag
caaagatcaaaagctgttactgagggatttgtacggttatacaaggaagggcttatctat
agggatgttcggcttgttaattgggattgtgttttgaaaacagccgtatctgacgatgag
gttgagcataccgatatcaaagaaaaaacgctacttaaagttcctggctatgagaagccg
gtagaatttggtctgcttacttcatttgcttatcctctggagggaggcttgggcgaggtt
gtcgttgccactacaagggtggaaacaatgcttggggatactgccattgctattcatcct
gatgatgcaagatacaagcatcttcatggaaaatttgctgtacatccatttaatggacgg
aggttaccaattatctgtgatggaatacttgttgatccaaactttggtactggttgtgtt
aagatcactccagcccatgaccccaatgattgtgaggtcggaaagcgtcacaatcttgaa
tttataaacatattaacggatgatggaaaaataaacacaaacggcgggtctgacttcaca
gggatgccacggtttgcagcgcgtgaggcagttgttgaagctctgaagaagaaggggctg
tacagaggtgcccaaaacaatgaaatgaggcttggactttgccaaagaaccagtgatgtc
attgagcctatgattaagcctcaatggtacgtcaattgcggcatgattgcaaaggaggct
ctcgatgttgctatcactgatgaaaacaagaagctcgagtttataccaaagcagtacacg
gcagagtggagaagatggctagagaacatacgtgactggtgtatttccagacagctttgg
tggggccaccgaattccagcatggtatgcaacactagaggaagatcagcgtaaggagatc
ggtgcgtacattgaccattgggttgttgcaagaaccgaggaagaagctcgaaaagaggct
gctgaaaaatttcctgggaagaaatttgaactcactcaagatcatgatgtgcttgatacg
tggttctcttctgggctctttccattatctgttctgggatggcctgatgaaaccgatgac
ttcaaagccttctatccgacatctgtcctagaaactgggcatgatattctctttttttgg
gttgctcgtatggttatgatgggaatgaaactaggtggtgacgttccattcagtaaggtt
tatttgcatcctatgatacgtgatgcacatgggcgtaagatgtcaaaatctcttggaaat
gtcattgatccgcttgatgtaataaatggggtaactcttgatggtcttcataagaaatta
gaagagggtaacttggatccgaaagaggtggctgttgccaaagaaggacaagagaaggac
tttccgaatggtatttctgaatgtggtactgacgctcttcggtttgcactcgtctcttat
actgctcagtctgacaaaataaacctggacatcctccgagtggttggttaccgtcaatgg
tgtaacaagctttggaacgctgtcagatttgcgatgatgaggcttggcgatgattattcc
cctccgctgactctaagccctgaaacgatgccattcagctgccaatggattctctctgta
ctaaataaagcaatatcaaagacggtggattcactaaatgcatttgagttctcggatgct
gccaacacagtatatgcatggtggcaataccagttctgtgatgtttacattgaagccatc
aagccttattttgctggtgacaaccctgcgtttgcttcagagagggctcatgcacaacac
gctctctgggtatctctggagactggtttgagactgcttcaccctctgatgccttttgtt
actgaagagctatggcaacgtctgccttcacccaaaaactctgaaagaaaggcgtctatc
atgatatgtgactacccctctgctgtagagaactggacaaacgaaaaagtggagaccgaa
atggaaaccgttctagcgagtgtgaagtgcctgagagcactccgtgcagagttgctggag
aaacagaagaatgaaaggttacctgcctttgctctgtgtgaaaacaacgtaacatctgaa
attgtaaaatctcacgagttggagatcagaacacttgcaaatctatcgtcgttagaggtt
ctgttaaatggagaacacgcagccccagctggttctgcagttgagacggtgaacgagaac
ctcaaggtataccttaaagtggacagagccattaacacagaagctgagcaagaaaagatc
aaaaacaagattgacgaactacaaaaacaaaaggagaagctgcagaagatgatgagtgtg
tctggttacgaagagaaggtccctgcaaacattaaagaagataacgccacaaagctcgct
aagattctccaagaattcgatttctttgagaaggagagtgctcgtctcgttgcagagaca
gaaacctcaggaaatcaacaagtggagcagaagaaatga
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