KEGG   Raphanus sativus (radish): 108807614
Entry
108807614         CDS       T06014                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108807614
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108807614
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108807614
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     108807614
SSDB
Motif
Pfam: LSM Hfq ISP1_C
Other DBs
NCBI-GeneID: 108807614
NCBI-ProteinID: XP_018435383
UniProt: A0A6J0JKL0
LinkDB
Position
6:complement(5472429..5473263)
AA seq 120 aa
MLASALYNYDDAGKIVVLLRDGRKLMGTLRFFDQFANAVLEGVCERVIVGEQYNDIPLGL
YVIRGENVVLIGDLDTEREELPPHMVRVSETEIKRAQKVEREASELRGTMRKRMEFLDFD
NT seq 363 nt   +upstreamnt  +downstreamnt
atgttggcctctgctctttataattatgatgatgcaggaaagatagttgtgctgcttaga
gatggtagaaagctaatgggaacactccgtttctttgatcaattcgccaatgcggtttta
gaaggtgtttgcgagagggtaattgttggtgagcaatacaacgacattcctttaggcctc
tatgtaatccgtggagagaatgttgttctaattggtgaccttgacacggagagagaggag
cttcctccacatatggttcgcgtctcagagacagagattaaaagggcgcagaaagtggaa
agggaagcgagtgagctgagaggaacaatgagaaagagaatggagtttcttgactttgat
taa

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