Raphanus sativus (radish): 108807614
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Entry
108807614 CDS
T06014
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108807614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108807614
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108807614
mRNA degradation factors
5'-3' decay
Lsm complex
108807614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
ISP1_C
Motif
Other DBs
NCBI-GeneID:
108807614
NCBI-ProteinID:
XP_018435383
UniProt:
A0A6J0JKL0
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Position
6:complement(5472429..5473263)
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AA seq
120 aa
AA seq
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MLASALYNYDDAGKIVVLLRDGRKLMGTLRFFDQFANAVLEGVCERVIVGEQYNDIPLGL
YVIRGENVVLIGDLDTEREELPPHMVRVSETEIKRAQKVEREASELRGTMRKRMEFLDFD
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgttggcctctgctctttataattatgatgatgcaggaaagatagttgtgctgcttaga
gatggtagaaagctaatgggaacactccgtttctttgatcaattcgccaatgcggtttta
gaaggtgtttgcgagagggtaattgttggtgagcaatacaacgacattcctttaggcctc
tatgtaatccgtggagagaatgttgttctaattggtgaccttgacacggagagagaggag
cttcctccacatatggttcgcgtctcagagacagagattaaaagggcgcagaaagtggaa
agggaagcgagtgagctgagaggaacaatgagaaagagaatggagtttcttgactttgat
taa
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