KEGG   Raphanus sativus (radish): 108807792
Entry
108807792         CDS       T06014                                 
Name
(RefSeq) LOW QUALITY PROTEIN: AP-1 complex subunit gamma-2
  KO
K12391  AP-1 complex subunit gamma-1
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04142  Lysosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    108807792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108807792
Membrane trafficking [BR:rsz04131]
 Endosome - Golgi transport
  Others
   AP-1 complex
    108807792
SSDB
Motif
Pfam: Adaptin_N INTS1_R4 Alpha_adaptinC2 Cnd1
Other DBs
NCBI-GeneID: 108807792
NCBI-ProteinID: XP_056842900
UniProt: A0A9W3BUD3
LinkDB
Position
6:10464381..10470726
AA seq 868 aa
MNGSDMIRASKTAAEERAVVRKECAAIRASINENEQDYMHRDLAKLMFIHMLGYPTHFGQ
MECLKLIASTGFPEKRIGYLGLMLFLDERKQVLMLVTNSLKQYPFSTLPFLLXVLASDLN
HTNQYTVGLALCALANISSADMARDLAPEVERLLQFRDPNIRKKLICAIRIIRKVPDLSE
NFTSPAASLLKEKHHGVLITGIHLCTEICIVSSEALEYFAKKCTEGLVKTLRGIANCCVF
WAKGDAEASDRMNDILAQVASKTESNKNAGNGILYECIQTIMSIEENGGLRVLAINILGK
LLSNRDNNIRYIALNMLMRALTVDSKAVQRHRVTILECVKDSDASIQKMALEFIYLLVNE
NNVKPLAKELIEYLEVSEQDFKGDLTEKICSIVERFVPEKIWYIDQMLKVLSEAGNYVKE
DVWHALIVVITNAPDLHGYTVRALYRALHTSSEQENLVRVAIWCIGEYADLLVNNNGMLE
LDEQITVTESDAVDVVECXSAIKHHTSDVTTKAMALIALLKISSRFPSISERVKSIIGQN
KAXFVLELQQRSMEFSSVIQKHQNIRSSLVERMPVLDEATFSGRRAGSLPTAVSTSGKSS
LSIPNGVVKAAAPLVDLLDVSSDDAPAPTSSSANFLQDLLGVDLTQPSPHPGTTQPSKAG
ADILLDLVSFGSPAPSSISGDLLSVDENNAPVTTINAISSNSPTAPSSVMDLLDGFGKDG
DVLEITSMNAQAQPIRQWNPLIAHVESLSSPKHLKLLNLLAMQASIYFIWTERNSRLHRQ
LFRPPSSIIASASTQIRNRISSLRDSSPALASSISNSLTANGNIKQTMRVTNSQYGKKPM
VMRMRVGYKIDGKDVLEEGQINNFPREL
NT seq 2607 nt   +upstreamnt  +downstreamnt
atgaatggtagcgacatgatccgggcgagtaaaaccgctgctgaggaacgcgctgttgta
aggaaagagtgtgctgcgatccgagcttccataaacgaaaacgagcaggactacatgcac
cgtgatctcgcgaagctcatgttcatccacatgcttggttaccctactcattttggtcag
atggaatgcctcaaactaattgcttcgactgggtttccagagaagaggatcggttatctt
ggtttgatgttgtttcttgacgaaaggaaacaagtgcttatgctcgtcaccaactccctc
aagcagtatccttttagcactttaccctttttgttgtaagttttagcttccgacctgaat
catacaaatcagtatactgtggggcttgctctttgtgctttagccaatatctcttctgct
gatatggctcgtgatctcgctcctgaagttgaaagattacttcagtttcgtgatcccaac
atacgcaagaaactcatttgcgccatacggatcatcagaaaagttccggatctttctgag
aactttactagccctgccgcttctttactcaaagaaaagcatcatggtgttctcattacg
ggaattcacctttgtacggaaatatgtatagtcagttccgaagcccttgaatatttcgca
aagaaatgcacagagggcttggttaaaaccctgaggggtattgcaaactgttgcgtattt
tgggccaaaggggatgcagaggccagtgaccgtatgaacgatatacttgctcaggtggca
tctaaaaccgagtcaaacaaaaatgcaggcaacggtatcctatatgaatgcattcaaacg
ataatgagcatcgaagaaaatggtggtttacgtgtccttgcaatcaatattttgggaaaa
ttattgtccaaccgagataataacatcagatatatagcattaaatatgctgatgagagcc
ttaacagttgattccaaagcggttcagagacacagagttacaatactggagtgcgttaag
gattcagatgcttcaattcagaaaatggcacttgaatttatttacctcttggtgaatgag
aataacgtgaagccactagcaaaggagcttatagaatatttggaagtaagcgaacaagat
tttaagggagatcttacggaaaagatatgttccattgtggaaaggtttgttccagagaaa
atctggtacattgatcaaatgctgaaggttctatctgaggctggtaattatgtgaaagag
gatgtatggcatgcgctgattgttgttataacaaatgctcctgatctccatgggtacact
gtcagggctttgtacagagcattacatacatcttctgaacaggaaaaccttgtgcgggtt
gcaatatggtgcataggagaatatgctgatctgttggttaacaataatggaatgcttgaa
ttagatgaacaaataacggtaacagagtcagatgcagttgatgttgtcgagtgctagtct
gctattaagcatcatacatcagatgtcacaactaaggccatggcactcattgctttgtta
aagatctcatctcgtttcccttctatttcagagagggttaaaagtattataggacagaac
aaagcttaatttgtcttagaactgcaacaaaggtctatggagttcagttcagttatccaa
aagcatcagaacataagatcttccctggttgaaagaatgccggtccttgatgaggcaaca
tttagtggaaggagagctggttctttaccaacagctgtgtcaacttccggaaagtcttca
cttagtattccgaacggtgttgttaaagctgcagctcctcttgtagatttactcgacgtg
agttctgatgatgctcctgcccctacctcctccagtgctaacttccttcaagatcttctt
ggcgttgatttaacgcagccttcgccacatcctggtaccacgcagccatcaaaagctggt
gctgatattcttttagatctagtgtcattcggaagtcctgctcctagctcgatcagtgga
gacttattatctgttgatgagaataatgctccagtaaccaccatcaatgcaatttcatca
aattctcccacggcgccgtcttcagtgatggatttgttggatggatttggtaaagatggc
gatgtcctagagatcacctcgatgaacgcccaagcgcaaccaatacgccaatggaatcct
ctcattgcacacgtcgaatcactgtcatccccaaaacacttgaagctattgaatctcctc
gccatgcaagcatcgatctacttcatctggacagagaggaactcccgacttcacagacag
ctcttccgtccaccctcctcgataatcgcttcggcttccactcaaatccgtaaccgtatc
tcaagtctgagagactcctcccctgctctggcctcatcgatcagcaactctcttactgcc
aatggaaatatcaaacaaactatgagagttacaaatagccagtacggaaagaaacccatg
gtgatgcggatgcgggtaggttacaagattgacggtaaagatgtgttggaggaaggacaa
atcaacaattttcctcgtgagttatga

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