Raphanus sativus (radish): 108807949
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Entry
108807949 CDS
T06014
Name
(RefSeq) probable disease resistance protein RPP1
Organism
rsz
Raphanus sativus (radish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
NB-ARC
TIR_2
AAA_22
RNA_helicase
AAA_16
nSTAND3
AAA_18
AAA_14
MeaB
DUF87
MMR_HSR1
ThsB_TIR
NPHP3_N
AAA
ABC_tran
Sushi_2
Motif
Other DBs
NCBI-GeneID:
108807949
NCBI-ProteinID:
XP_018435671
UniProt:
A0A6J0JKY5
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Position
6:complement(16987782..16989874)
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AA seq
443 aa
AA seq
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MDSSLFRTVFVAAIGFLAFYISNHENREHDSFSSSSSLSLSSPSLSLSRNWTHDVFPSFH
GEDVRKDFLSHIQKGFERKGIKQFNDNEMERGESISFQLVRAIRGSKIAVVLFSKNYASS
KWCLDELVEIMKCRREFGQIVIAVFYKVDPSDVRKQTGDFGKVFRQTCTGKTNEEIRRWR
VALAEVAPIAGYHSNNWDNEADMVENITTDVSKKLTHFMRSIDFNYDLVGMGAHMEEMRR
LLYLDSDEVKMIGIWGLPGIGKSTITKYLFKQLSQRFNVSLYIKDINALYTRPASSDVEF
MSLLTYQNDNEVIDLGVEREKLKRKKVLVVIDNVHRSVQLDAMMKVSPWFGPGSRVVIAV
QDREVLEAHTIDDVYGVALPSDYEAMQIFCLAAFDQKFPKDGYEDLAIRVCNVAGRLPLR
LKIMGSYFRGMSKQEWIDKIDPL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggattcttccttattccgtacagtttttgttgctgcaataggcttcttagcattctat
atatccaatcacgaaaacagagaacacgattctttttcttcctcttcatcattaagtctc
tcttcaccttcactttctttgtctcgtaactggacacatgatgtctttccaagcttccac
ggggaagatgtccgaaaagactttttaagtcacattcaaaaggggtttgagagaaaagga
atcaaacaattcaatgacaatgagatggagagaggagaatccatatcttttcaacttgta
agggccattagaggatctaaaatcgcggtcgtcttgttctcgaagaactatgcttcttca
aaatggtgtcttgatgaactggtggagattatgaagtgtaggcgagagtttggtcaaata
gtgattgcggttttctataaggtggatccatctgatgtacgcaagcaaaccggagatttt
gggaaggtcttcagacaaacttgtaccggtaaaactaatgaggaaatcagaagatggaga
gtagctttggcagaagtagccccaattgctggttatcattcaaacaactgggataatgaa
gcagacatggtagagaatatcaccactgatgtttcaaaaaagctgactcatttcatgaga
tcaattgatttcaattacgacttagttggaatgggagctcatatggaagagatgagacga
ttgttatacctagattcggatgaagtgaagatgataggcatttggggtcttcctgggatt
ggtaagagcacaatcactaaatatctctttaaacaactctctcaaagattcaacgtgagt
ctctatatcaaggacatcaacgcactttatacaagaccagcttcttctgatgtggagttt
atgtctctactaacataccaaaatgataacgaagttattgacctaggagttgaaagagag
aagctgaaacgcaagaaagtgcttgtagttattgacaatgtccacagatcagtacagtta
gatgcaatgatgaaagtaagtccatggtttggtcctggaagccgggttgtcatcgcggta
caggacagggaagttttggaggcacatacgattgatgatgtttatggagtggctttacca
tcagactatgaagctatgcaaatattttgtttggctgcttttgatcaaaagtttcccaaa
gatggttatgaggatcttgctataagagtttgcaatgttgctggcagactacctttgaga
ctgaaaattatgggctcttatttcagaggaatgtccaagcaagagtggattgataagatt
gatccactttga
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