Raphanus sativus (radish): 108808035
Help
Entry
108808035 CDS
T06014
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108808035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108808035
Membrane trafficking [BR:
rsz04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
108808035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Mon2_C
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
108808035
NCBI-ProteinID:
XP_056851836
UniProt:
A0A9W3CJZ8
LinkDB
All DBs
Position
Unknown
AA seq
1449 aa
AA seq
DB search
MGRLKLHSGINAIEEEPEEDFESSESSNTTTLACMIDTEIAAVLAVMRRNVRWGGRYMSG
DDQLEHSLIQSLKALRKQLFSWNQPWHTISPMLYLQPFLDVIRSDETGAPITSIALSSVY
KILSLNVIDQNTTNIEDAMHLIVDSVTSCRFEVTDPASEEVVLMKILQVLLACMKNRASV
MLSNQHVCTVLNTCFRVVHQSGMKGELLQRVARHTMHELVRCIFSHLPDVDRTETTLVNR
SENINQEKAGVDNNYAIVTKPVEDGNANSEYDTENSVATFASGAQSLMDDGPAGPGSRKP
ASPYDLHIMTEPYGVPSMVEIFHFLCSLLNMVEHVGMGARANTISFDEDVPLFALNMINS
AIELGGASIRHHPRLLSLIQDELFRNLMQFGLSMSPLILSMVCSIVLNLYQHLRTELKLQ
LEAFFSCVILRLAQGKYGPSYQQQEVAMEALVNFCRQKSFMVEMYANLDCDITCSNVFEE
LSNLISKSTFPVNSPLSAMHILALDGLIAVIQGMAERISNGLTGLDLGPVHLDEYTPFWM
VKCDDYSDPNHWVSFVRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVA
CFFRYTAGLDKNLVGDFLGNHDEFCVQVLNEFAGTFDFQYMNLDTALRLFLETFRLPGES
QKIQRVLEAFSERYYMQSPEILANKDAALVLSYSIIMLNTDQHNVQVKKKMTEEDFIRNN
RHINGGNDLPREFLSELYHSICNNEIRTTPEQGSGFPEMTPSRWIDLMHKSKKTAPYILA
DSRAYLDHDMFAIMSGPTIAAISVVFDHAEHEDVYQTCIDGFLAIAKISACHHLEDVLDD
LVVSLCKFTTLLNPSSADEPVLAFGDDPKARMATITIFTIANKYGDYIRTGWRNILDCIL
RLHKLGLLPARVATDAADESELSSEQGQGKPLANSLSSAHLQAMGTPRRSSGLMGRFSQL
LSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLARALIWAAGR
PQKGNNSPEDEDTAVFCLELLIAITLNNRDRIVLLWQGVYEHIATIAQSTVMPCNLVDKA
IFGLLRICQRLLPYKESLADELLRSLQLVLKLDARVADAYCEKIADEVSRLVKANANHIR
SQAGWRTITSLLSITARHPEASEAGFNAVSFVMSEGTHLYPANYVLCVDAARQFAESRVG
QSERSIRALDLMGDSLEQLAKWARSAKENMGEEDFAKMSQDFGEMWLRLVQGLRKVCLDQ
REDVRNHALQSLQKCLGGVDGINLAHSMWSQCFDKVIFTVLDDLLEIASGSQKDYRNMEG
TLLLAIKLLSKVFLQLLQELSQLSTFCKLWLGVLTRMEKYMKVKVRGKKSEKLQETVPEL
LKNILLVMKTKGVLLQRSALGGDSLWELTWLHVNNIAPSMRLELFPDQESAEPCDDESNG
LGSAEAGAT
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgccttaagttgcattctggaatcaatgccattgaggaagagcctgaggaggac
ttcgagagtagtgagtcgagcaatacaaccactttagcatgcatgatcgatactgaaatc
gctgctgttctggcggtcatgagaagaaacgtaagatggggaggtcgatacatgtctggt
gatgatcaactagagcactcgttgattcagtcgcttaaagctcttaggaaacagctcttc
tcatggaaccaaccctggcatacgataagtcccatgctctatcttcagccctttctagat
gtgatacgctcggatgaaaccggagcaccgataaccagcattgctttgtcgtcggtttac
aagatcctgagtctgaatgtgattgatcagaatactacaaacattgaagacgccatgcac
ttgatagttgattctgtgacaagctgccgttttgaggtgacggatcctgcatcagaggag
gttgtgctgatgaagatacttcaggttcttctggcatgtatgaaaaatagggcgtcggtt
atgctaagcaaccagcatgtatgcacggtcctcaacacttgttttcgtgttgtccaccaa
tcaggaatgaaaggtgagttattgcaacgtgtagctcgccacacgatgcatgaacttgtg
aggtgcatcttctcccatctccctgatgttgacaggacggaaactacacttgtcaacaga
tctgaaaacatcaaccaagagaaagctggagtagacaataattatgccattgtgactaaa
ccagtggaggatggaaatgctaattccgagtatgatactgaaaattctgtggcaactttt
gcatctggtgctcaaagtttgatggatgatggaccggctgggcctggaagcagaaagccg
gcttctccatacgatttgcatataatgacagagccatacggagttcctagtatggtggaa
atatttcactttttatgctctttgttaaatatggtcgaacatgttgggatgggcgcccga
gcaaataccatatcatttgatgaagatgtgcctctctttgcgttgaacatgatcaactca
gccattgaattgggtggagcgtccatccgccatcacccaagattgttaagtctgattcaa
gatgagttatttcgtaatctgatgcaattcggcttgtcgatgagcccccttattctttcg
atggtttgcagcattgttctcaatttgtatcaacatctacgtactgagctcaaactgcag
cttgaagcatttttttcctgtgtaattctgaggcttgcgcaaggaaaatatgggccttcg
tatcagcagcaagaggttgctatggaagctcttgtgaacttctgtaggcagaagagtttt
atggtggagatgtatgccaatcttgattgtgatataacttgcagcaacgtgtttgaggag
ctatctaatctaatatccaagagcacatttcctgtgaacagtcctttgtccgcaatgcac
attcttgcgctggatggcttaattgctgttattcaaggaatggccgagaggataagtaat
ggattgactggtttagacttagggcctgtccatcttgatgagtacacgcctttctggatg
gtgaagtgtgatgattacagtgatccaaatcactgggtttcatttgtccgcaggagaaaa
tatatcaagagaaggttaatgattggagcagatcattttaacagggatccaaagaagggg
ttagagtttctccaagggacacatcttttgcctgacaaacttgatccccagagcgtagct
tgctttttcagatatactgctgggcttgataagaaccttgtgggggattttcttgggaat
cacgacgaattttgtgttcaggttctcaatgagtttgctgggactttcgatttccagtac
atgaatttggatactgcactccgtctcttcttggaaactttcaggttgcctggagaatct
cagaaaatacagagggttcttgaagcgttctctgaaagatactatatgcagtctcctgag
attcttgctaacaaggacgctgctcttgtgttatcatactctattatcatgctcaacact
gatcaacacaacgttcaagtaaagaaaaagatgacagaagaggattttattcgcaacaat
aggcatatcaatggaggaaatgatcttcctcgagaatttttgtctgaactttatcactcc
atctgcaacaatgagatccggactactccagaacaaggttcaggctttcctgaaatgacc
cccagccgttggattgatttgatgcataaatccaagaaaactgctccgtatattttggct
gattcaagggcttatcttgaccacgatatgtttgctatcatgtctggtccaactattgct
gccatttcagtcgtttttgaccatgcagaacatgaagacgtttaccagacatgcattgat
ggattcttggctattgctaaaatttctgcttgccatcatttggaagatgtgcttgatgat
ctggttgtgtctctctgcaaattcacaacactgttaaatccatcatctgcggatgaaccg
gttctagcatttggtgatgacccaaaagcaaggatggcaactatcactatatttaccatt
gcaaacaaatatggagattatattcgtacgggctggaggaacatattggactgcatctta
cggctgcataaacttggacttctgccagctcgtgtagccactgatgcagctgatgaatca
gaactttcatctgagcaaggacaagggaagcctcttgcgaattccctatcttcagctcat
ctacaagctatgggaactccgaggagatcttccgggctgatgggaaggtttagtcagctt
ctttcacttgatacggaagagccaagatcacagcctactgagcaacagcttgccgctcat
caacgaacacttcaaacaattcagaaatgtcacattgacagcatatttaccgaaagcaag
tttctacaagctgaatctttgctgcagcttgcacgtgctctcatttgggctgcaggtagg
cctcaaaaaggaaacaattctccagaggatgaggatactgcagttttctgcctggaattg
ctcattgcaatcactcttaacaacagagacaggatcgttctcctatggcaaggcgtctac
gaacacatagctaccattgctcagtccacggtgatgccctgtaacttagtggacaaagct
atatttggtctacttcggatctgccagagactacttccttataaagaaagcctagctgat
gagcttttgagatctcttcagcttgtgctgaaactggatgcacgtgttgccgatgcctat
tgtgagaaaattgctgatgaagtcagccgccttgtgaaagccaatgctaatcacattagg
tctcaggcgggatggagaacaataacatcgctactctccattacagcgaggcaccctgaa
gcttctgaagcaggatttaatgccgtatcatttgtgatgtcggaaggaactcacctgtat
ccagccaattatgttctctgtgttgatgctgcacgacagtttgctgaatcccgtgtggga
caatcggaacggtctatccgcgccctcgatctaatgggagattcattagagcagttggct
aaatgggctcgttcagccaaggagaacatgggagaagaagattttgcgaagatgtcacaa
gatttcggggaaatgtggctaaggcttgttcaaggactaagaaaagtgtgtttagaccag
agagaggatgtccgaaaccacgccttacagtcattacaaaagtgtttgggcggagtagac
gggatcaatctagcccatagcatgtggtctcagtgctttgacaaagtaatcttcaccgtt
ttagacgacttactcgagatcgcttcagggtcacagaaagactaccggaacatggaaggc
acgttgcttctggcaataaaactcctctccaaagtgtttcttcagctactccaagagcta
tctcagttatcaaccttctgcaagctatggctgggcgtcctgacccggatggagaaatac
atgaaagtgaaagtaaggggcaagaaaagcgagaagctacaagaaaccgtgccagagctt
ctcaagaacatattgcttgtgatgaagacgaaaggagtgcttttgcagagaagtgctctt
ggtggagatagcttatgggagttaacatggcttcacgttaacaacatcgctccatctatg
aggctggagctattccctgatcaagaatctgcagagccttgcgatgatgagagcaatggc
ttaggttctgctgaagctggagcgacataa
DBGET
integrated database retrieval system
