Raphanus sativus (radish): 108808375
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Entry
108808375 CDS
T06014
Name
(RefSeq) translation initiation factor IF-2, chloroplastic
KO
K02519
translation initiation factor IF-2
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rsz03012
]
108808375
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108808375
Translation factors [BR:
rsz03012
]
Eukaryotic type
Initiation factors
MTIFs
108808375
Prokaryotic type
108808375
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
108808375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
EF-G_D2
MMR_HSR1
IF2_N
GTP_EFTU_D2
Ras
RsgA_GTPase
DUF6115
Roc
Arf
Motif
Other DBs
NCBI-GeneID:
108808375
NCBI-ProteinID:
XP_018436036
UniProt:
A0A6J0JM03
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All DBs
Position
1:7702724..7707736
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AA seq
1026 aa
AA seq
DB search
MPSMLVLVGTVPSLVSLVSPPGGSVSGTSLSYGSYALVKRVSLSRKGNKRWLCRYSSVSS
SATTSTSTDFIAEANNGNSVSIDSNSFKGGDDDSEIVLKQAPKPVLKPPVARVERGGVGL
SSSAPWSKELSNGVKFDGEEERNKVIESLGEVLDKAESLEIPKPGKKEGGEGVKPSQPIS
DSRNGAFASGGGTRKTKTMKSVWRKGDAVAAVEKVVKQEPKIDSRGRQGDGTQLSPPQAP
LRPQPPLRAQPQLQGKPMVAPPPVKKPILKDLGMSSKPSGPILKDVGMASKPPPVSEEVD
SSNKSKERKPILVDKFASKKKSADPAASQTVLAPTKPGKGPPSSKFRVEHRNKKNASANP
RRRMVAQDDADEDASELNVSIPGSGRKGRKWSKASRKAARLQAARDAAPVKAEILEVEEE
GMSIEDLAYNLAIGEGDILGYLYSKGIRPDGVQTLDREMVRMICRDYDVEVLDADSVQVE
EMAKKKEIFDEEDLDKLEDRPPVITIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGA
YKVSVPVDGNVQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHA
KAAGVPIVIAINKIDKDGASPERVMQELSSIGLMPEDWGGDVPMVQISALKGENVDDLLE
TVMLVAELQELKANPDRNAKGIVIEAGLDKAKGPFATFIVQKGTLKRGDVVVCGEAFGKV
RALFDHSGERVDEAGPSIPVQVIGLNNVPIAGDEFEIVSSLDVAREMAEARAVSLRDERI
SAKAGDGKVTLSSLASAVSAKKMSGLDLHQLNIILKVDVQGSIEAVRQALQVLPQENVTL
KFLLQATGDVSNSDVDLASASEAIIFGFSVKASGSVKKAAENKGVEIRLYRVIYELIDDV
RNAMEGLLESVEEQIPIGSAEVRATFSSGSGRVAGCMVNEGKFVKDCGIRVIRKGKTVHV
GVLDSLKRVKENVKEVGAGLECGIGMDDYDDWIEGDTIEAFNAVQKRRTLEEASASMSAA
IEEAGV
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgatgctggtcctcgtcggcacagtgccgtcgttggtttctctggttagtcct
ccaggaggtagtgtttctggaactagtctgtcgtatggatcgtatgcattagtaaagagg
gtttctttgtcaaggaaggggaataagagatggctgtgtagatattcttctgtttcgtct
tcagctactactagtactagtactgacttcatcgctgaggcgaacaacggcaactcagtt
tctatagattctaactcttttaaaggaggggatgatgacagcgagattgtgctcaagcag
gctcctaaacctgtgttgaaaccccccgtggcaagagtggagaggggtggtgtcgggttg
agttcttctgctccttggagcaaggagttatcgaacggggttaagtttgatggagaggaa
gagaggaataaggttattgaatctcttggagaagtgttggataaagctgagagtttagag
attccaaaaccgggtaagaaagaaggtggtgagggtgttaaaccgtcgcagcctattagt
gactccagaaacggtgcctttgcgagtggtggagggacaaggaagacgaagacgatgaag
agcgtgtggcgtaagggagatgctgttgcagctgtggagaaagttgtgaagcaagaaccc
aaaattgatagtaggggaagacagggtgatggcactcaattgtcaccacctcaggcacct
ttaagacctcaaccacctttaagagctcagccacagctgcaagggaagcctatggtagct
ccaccacctgtgaagaaacccattttgaaagatcttggtatgtcatcaaaaccttcaggt
cccatcttgaaagatgttggtatggcatcaaagccgcctccagtttccgaagaggttgat
tccagcaacaaaagtaaagaaaggaagcctatattggttgataagtttgcttcaaagaaa
aaaagtgctgatcctgcggcctctcagactgtgttagctcctactaagcctggaaaaggt
cctccttctagcaagttcagagttgagcaccgtaataaaaagaacgcatcagctaatcca
aggcgaagaatggttgctcaagacgacgcagacgaagatgcgtcggagttgaatgtctcc
attcctggatcaggtagaaaagggaggaagtggagtaaagctagtaggaaggctgcaaga
ctccaggctgcaagagatgcagcgcctgttaaagctgaaatcttagaggttgaggaagaa
ggcatgtccattgaggatttggcttacaacttggccataggtgaaggtgacatccttggt
tatctatactcgaaagggatcaggcctgatggtgtgcagactttggacagagagatggtg
aggatgatttgtagagattatgatgtcgaggtccttgatgctgattcagttcaagttgaa
gaaatggcaaagaaaaaggaaatttttgatgaagaagatttggacaagttggaagacagg
cctcctgtcatcaccataatgggtcatgtcgaccacggaaagactactcttctggactat
atcagaaaaagcaaggttgcagcttcagaagcagggggaattacacaagggatcggtgca
tataaggtgtcagttcctgttgatgggaatgttcagtcatgcgttttccttgatactcct
ggacacgaggcatttggtgcaatgagagctcgcggagcacgggtgactgacatcgcaatc
attgtggttgctgctgatgatggaattcgtcctcagacaaatgaagcaatagctcacgca
aaggctgctggtgtccctatagtcatagctatcaataagatagataaagacggagctagt
ccagagagagtgatgcaagagctttcttcaattggtttgatgcctgaagattggggtggt
gatgttccaatggttcagatcagtgcgttgaaaggggagaatgtcgatgatctgttggaa
actgtcatgcttgttgcagagctgcaagagttgaaagcaaatccagacagaaatgccaag
ggcattgtcattgaagctggacttgataaagcgaaaggaccatttgcgacattcattgtt
cagaagggcactttgaaaagaggggatgttgttgtctgtggagaagctttcggaaaggta
cgagctttatttgatcacagcggggaacgagttgatgaagctggaccctccatacctgta
caggtgattggtttaaacaatgtacccattgctggtgacgagtttgagattgtctcttcc
cttgatgtggcgcgtgagatggcagaggcacgtgcagtatcactacgagatgaaagaata
tctgcaaaggctggagatggaaaagtcacgctttcatccttagcttccgctgtatcagcc
aaaaagatgtcaggcttagatttgcatcagcttaatatcatcttgaaggttgatgtacag
ggatccattgaagctgtcagacaagctctgcaagtgcttcctcaagagaatgtgacattg
aaatttttgctacaagcgacaggggatgtgagcaacagtgatgttgatctagcttcagcg
agtgaagccatcattttcgggtttagtgtcaaagcatctggctccgttaaaaaagctgca
gaaaacaaaggtgttgaaatccggctatacagagttatctatgagcttattgacgatgta
cgaaacgcaatggaaggacttcttgagtctgttgaggaacaaatcccaatagggtcagca
gaagttcgagctactttcagcagtggaagcggtcgtgtggctggatgcatggtgaatgaa
ggcaaatttgtcaaagattgtggcatcagggtgatccggaagggtaaaaccgtccatgtc
ggtgtccttgattctcttaaacgtgtcaaagaaaatgtgaaagaggtgggtgctggatta
gaatgtggtatcggtatggatgactatgatgattggattgaaggagacaccattgaggcc
tttaacgcggttcaaaagaggagaacgttagaagaagcatctgcttcaatgtctgctgca
attgaagaggctggagtttga
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