Raphanus sativus (radish): 108808395
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Entry
108808395 CDS
T06014
Name
(RefSeq) syntaxin-125
KO
K08486
syntaxin 1B/2/3
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108808395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108808395
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108808395
Membrane trafficking [BR:
rsz04131
]
SNARE
Syntaxin (Qa)
Stx-PM
108808395
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108808395
Exosomal proteins of other body fluids (saliva and urine)
108808395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
STX6_10_61_N
Treslin_STD
COG6_N
CCDC-167
CD225
HTH_25
PNMA
Erp_C
Stonustoxin_helical
LMBR1
DUF1664
Motif
Other DBs
NCBI-GeneID:
108808395
NCBI-ProteinID:
XP_018436056
UniProt:
A0A6J0JM23
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All DBs
Position
1:complement(4908896..4910303)
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AA seq
298 aa
AA seq
DB search
MNDLFSNSFKRNQAQMSDVEAGQETMNLDKFFEDVENVKDDMKGVETLYKKLQGSNEECK
TVHNANKVKELRAKMDADVGQVLKRVKIIKQKLEALEKANANSRNVPGCGPGSSTDRTRS
SVVSGLGKKLKDLMDSFQSLRARMNDEYKETVERRYFTITGEKADEQTIDNLIASGESEN
FMQKAIQEQGRGQIMDTISEIQERHDAVKEIEKNLLELHQVFLDMAALVEAQGQQLNNIE
SHVAKASSFVRRGTDQLQDAREYQKSSRKWTCYAIILFIVVFILLLIPAMPHIMLMLK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacttattctcaaattcattcaagcggaaccaggctcaaatgagcgatgtcgag
gcaggtcaagaaacgatgaacctcgacaaattcttcgaggacgtggagaatgtcaaagat
gacatgaaaggagtcgagactctttataagaagcttcaaggctcgaacgaggaatgcaag
acggtgcacaacgccaataaggtgaaggagctacgcgctaagatggatgctgacgtaggt
caggttcttaagagggtcaaaatcattaagcagaagctcgaagccctagagaaagccaac
gctaatagccgtaacgtcccgggttgtgggcccggttcgtctacggataggactcggtct
tctgtggtcagcggtctcgggaagaagctcaaggacttgatggatagtttccagagtcta
cgtgcgcgaatgaacgatgagtataaggaaaccgtagagcgcaggtatttcacgataaca
ggagaaaaagcggacgagcaaacgattgataacttgattgcgagcggcgagagtgaaaat
ttcatgcaaaaagcgattcaagagcaaggaagaggtcagatcatggacacgatatctgag
atccaagaaagacatgatgcagtgaaggagatcgagaagaatctactggagttgcaccaa
gttttcttggacatggcggctctggtggaagcgcaggggcaacaactgaacaacatagag
agccatgttgcaaaggcgagctcgtttgtgagaagagggactgatcagctccaagacgcg
agagagtaccaaaagagctcgaggaaatggacttgttacgccatcattctcttcatcgtt
gtctttatccttcttctcattcccgctatgccacatattatgctcatgctgaaatga
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