Raphanus sativus (radish): 108808430
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Entry
108808430 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108808430
KO
K24260
WD repeat-containing protein 11
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108808430
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rsz03037
]
108808430
Membrane trafficking [BR:
rsz04131
]
Endosome - Lysosome transport
Others
Others
108808430
Cilium and associated proteins [BR:
rsz03037
]
Other cilia and associated proteins
Other cilium assembly proteins
108808430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
Beta-prop_WDR11_1st
TPR_WDR11
WD40_CDC20-Fz
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
108808430
NCBI-ProteinID:
XP_018436082
UniProt:
A0A6J0JKB8
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All DBs
Position
1:complement(26132882..26141329)
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AA seq
1306 aa
AA seq
DB search
MAAAKPSATDTWDSTLPGPPSRNNFGSSDLSPSGLLAFASGSSVSVVDSRSLQLVSTIPL
PPPPPPGALSPFVTSVRWIPLPLPRDLLSSEPSASHLLLAVADRHGRLALVDFHLRSVVV
WLNPSSDPKLGVQDLCWVQARPDTHVLATISGSSSLSIYTNDGVFWKYDSGSEVLSCLRR
DPYDSRHFCVLGLKGFLLSIKVLGDTENDVVIQEMQINTDSSDLLRLEREAATNGSGSSP
ASAAFPLYFARFAFSPHWKNILFLTFPRELLVFDLQYETPLSSTPLPRGCAKFMDVLPDP
NKELLYCAHLDGRLSIWRRQEGEQVHVMCTMEEYLPSIGMSIPSPSALAILLSQSDSTMQ
TITKLHPDGTSSVDFDNPFDFYDESLLVSETTFISLSDDGKIWKWVLSAEGVEDALKNVS
DLDIGTDAARPEAIVKKDSSDLDEGLATSRSRGHTSTSSLGKSDLSFKISLDGQLQLLSS
TVSTLAVPSPSLTATLARGGNIPAAAIPLVALGTQNGTIDVVDVSTNAVAASTSVHTGVV
RGLRWLGNSRLVSFSYSQVNDKSRGYINKLVVTCLRSGLNKPFRDLQKPERTPIRALRTS
SSGRYLLILFRDAPVEVWAMTKHPVMLRSLALPFTVVEWTLPAVPRPVQSSPSKQFPPAS
EGVTASADSKSDGSHEETIESFAFALVNGALGVFEVQGRRIRDFRPKWPSTSFVPSDGLV
TAMAYRLPHVVMGDRSGNIRWWDVTTGQSSAFNSHRDGVRRIKFSPVVAGDRSRGRVAVL
FNDNTFSVYDLDSPDPVAQSLLHPQIPGTLVLELDWLPLRTDKNDPLVLCIAGADSTFRL
VEVIVNEKKGGFVPQSKSVKERFRPMPMYSPILLPVPHALALRMILQLGVKPSWFNTCST
TLEKRPHLIRGMASSSKDLRSYMIQLPPLGDPVVPEMLLKILEPYRKEGCLLDDERAKIY
ADVVKKGYAARFAFAAAVFGETSEAYFWLQLPRAIRHLMNKLMRKSPQKIPSPASASGVD
EASMPSKISSTSSSPHEARKIDSMCDGSLRLMAFEREELWTRANERLPWHEKLEGEDCIQ
KQVHELISVGNLEAAVSLLLTSAPDSPYFYPNALRAVALSSAVSKSLLDLALKVVAANMV
RTDNSLTGTHLLCAVGRHQEACSQLQDSGRWTDAATLAATHLEGSDYARVLQRWADHVLH
AEHNVWRALILYVAAGSLQEALAALKEVQQPDTVAMFVLACNEIHSEIVTELSSEDEEGS
GELGTGMTDLPGLEPGKEEVAAVCEYFQQYQRKLVHLCMDSQPYAD
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcgaagccgtcggcaacggacacgtgggattcgactctcccaggtcctccg
agccgcaacaacttcggatcctccgatctgagtccctcgggtctcttggccttcgcctct
gggtcgtccgtctcggtggttgactctcgctccctccagctcgtctccacaatccctctc
cctcctcctcctcctcccggcgccctctcccctttcgtcacttccgtccgctggatccct
ctccctctcccccgcgatctcctctcctccgagccctccgcctcccaccttctcctcgcc
gtcgccgatcgtcacggccgtctcgccctcgttgacttccatcttcgttccgtcgtcgtc
tggcttaatccctcctccgatcccaagcttggcgtccaggacctctgctgggtccaggcc
cgccctgatactcatgtcctcgccaccatttccggctcttcctccctctctatctacacc
aacgacggcgttttctggaagtacgattccggctcggaggttctctcctgcctccgccgc
gatccctatgattctcgccatttctgcgtccttggcctcaagggcttcctcttgtccatc
aaggtactcggagacaccgagaatgacgtcgtcatccaggagatgcagatcaacaccgat
tcctctgaccttctcaggcttgaaagagaggctgccaccaatggctctggctcttctcct
gcttctgctgcctttcccctctactttgccaggtttgccttctccccgcactggaagaac
atactcttcctgaccttccccagggagctcttggtgtttgatctccagtacgagacgcct
ctctcttccacgccgttacctcgcggttgcgccaagttcatggatgtattgcctgatccc
aacaaagagttgctctattgtgctcatctcgatggcaggctcagcatttggcgtcgccaa
gaaggagaacaggtgcatgtcatgtgtaccatggaagagtatttaccatctattggaatg
tccattccttctccgtcagctttggctattctcctcagccaatcggattccacaatgcaa
actattacaaaacttcacccggatggaacttcctctgtggattttgataacccatttgac
ttttacgatgaaagccttcttgtctctgagacaacttttatctccctctctgatgacggt
aaaatatggaagtgggtcttaagcgctgaaggagttgaagatgctctgaaaaatgtgtca
gacttggacattggcactgacgcagcacgtcctgaagcaatagtaaaaaaagattcctca
gatctggatgagggactagctacaagtcgaagcagaggccacacatcaacttcatccttg
ggaaaatcagacctatcatttaagatcagcctggatggacagcttcagcttctttcttct
acagtctctacacttgctgttccatctccttctcttacagcaaccctagcgagagggggt
aacattcctgcagcagctattcctttggttgctttgggaactcagaacggaacaatcgat
gttgttgatgtatccacaaatgctgttgctgcaagcacttcggttcatacgggcgtagtt
aggggacttcggtggcttggaaattcaagattagtttcattttcttatagtcaggtgaat
gacaaaagcagaggctacataaataagcttgttgttacctgccttaggagtggtttgaat
aaaccatttcgggatttacaaaagccagagcgtactcccataagagctcttagaacttct
tcttccggaaggtatcttttaattctattccgtgatgctcctgtagaagtttgggcaatg
accaagcatccagtcatgcttagatcattagctcttccttttacggtagtagaatggacg
cttccagcagttccacgcccagttcaaagcagtccgtccaaacaatttccgccagcatct
gaaggagtaactgcttcagcggactccaagtcggatgggtcgcatgaggaaactatagag
agttttgcatttgcactagtaaatggtgcccttggagtattcgaagtccaaggacgtagg
attcgagatttcagaccaaagtggccatctacttcatttgttccctcagatggactggtt
acagccatggcttatcgcttacctcatgtggttatgggagatagatcaggaaacataaga
tggtgggatgtaacaactggacagtcatctgcatttaatagtcacagagacggagtacgt
agaatcaaattctcacctgttgttgctggagatcgcagccgagggcgtgtagctgtgcta
tttaatgacaatacattctctgtatatgatcttgattcaccagatccggtagcccagtcg
cttctgcacccccagattcctggcacccttgtactggaacttgattggttgcctctgaga
actgataaaaatgatccacttgttctatgcatagctggagctgatagcaccttccgactc
gttgaggttattgtaaatgaaaagaagggtggctttgtgccccagtctaaatctgtaaag
gagagattccgccctatgcctatgtactcccctatcctacttcctgtaccacatgcgctg
gcactacggatgattttacagttgggagtgaaaccatcttggtttaatacttgtagcacc
actttggagaaaaggcctcatttgatccgtggaatggcttcatcctctaaagatcttcgg
agctacatgattcagttaccacctttaggagaccctgtagtgccagagatgctactgaag
atactagaaccctatcggaaagaaggttgcttgttggatgatgaaagagcaaaaatctat
gctgatgtggtcaagaaaggttatgctgcaagatttgcttttgcggctgcagtttttggt
gaaacatcagaagcttatttctggttgcaactgcctcgtgccattcgccatctgatgaac
aagctgatgagaaagtctcctcagaaaatcccttcccctgcttcggcctcaggagttgat
gaagcatcaatgccgagtaaaatatcatctactagttcatcgccgcatgaagccaggaag
atagattctatgtgcgatggttcacttagattaatggcttttgagcgagaagaattatgg
acacgtgccaatgaacgtcttccttggcatgaaaaattggagggggaagattgcattcag
aaacaagtacacgagctgatatcagttggaaatttggaagctgctgttagtttgctgctt
acttctgctccagattctccatacttctatccaaatgctctccgagccgttgcactctct
tcagctgtgtctaaatctcttctcgaccttgcactgaaggttgttgcagccaacatggta
aggacggacaattcgctcactggcactcatcttctatgcgcggttggaagacatcaagaa
gcttgttcacagctacaagattctgggcgatggaccgatgctgctaccttggctgccact
catttagaaggatcggattatgccagggtactgcagaggtgggctgatcatgttctccac
gcggagcacaatgtgtggagggcacttatcttatatgtggctgctggttccctgcaagag
gcgctagcagctctgaaggaggtgcaacagccggacacagtagccatgtttgtgctggcc
tgtaatgagattcattcagaaattgtaacagagctatcaagcgaagacgaggagggtagt
ggggaattaggcacaggaatgacggatctaccaggtctagaaccagggaaggaagaagta
gcagcggtttgcgaatactttcaacagtaccagagaaagttggtgcatttgtgcatggac
tcacagccctacgcagactga
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