Raphanus sativus (radish): 108808475
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Entry
108808475 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108808475
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108808475
Enzymes [BR:
rsz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
108808475
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108808475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
108808475
NCBI-ProteinID:
XP_018436115
UniProt:
A0A6J0JKD5
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Position
1:complement(8937984..8941671)
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AA seq
502 aa
AA seq
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MSDETKPSAGDSSGLSNGLVSDSDRRVYQAAQSLHSSSVKDLLSLGVCERCVFRLVSVEP
FDSDLSSVSASTLRSWLEEASAAAAASSESSCSRVCIVCLGVLQFVFSDAKQTLARSECG
SDYAARVTELVKREGHEFDSFGLEVSVPSTVVENERAVLLYLKGKYETEGWVQSEKISVK
DALKVLVLDPLKASLGAKSDSSSFHIRLTYSMTSDEVQDASETTHERKKRKTDEENGSTS
MSENSFEKVYEPCILSVNCNKMPIFFSGRYFKYSRNVSQTRWIIDDERMGEASVEELIGG
NILPACLGDSYKFHAAGREDIDVRMLGSGRPFLIEVQNSRKCPSQQSLMEIEEKINNSEK
KLVGVKDLKFIGSQCWAMMREGEAEKQKQYAALVWIARPLEEKDINSISSLIELKILQKT
PVRVLHRRSPLERERTIHWMKVEKIKGSSHYFLLHLCTQAGTYIKEFVHGDLGRTSPSMG
SILGCRAEIIQLDVTDVKMGDS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaaacaaaaccctcggccggcgactcatccggtctttccaacggcctcgta
agcgacagtgaccgacgcgtgtaccaagcagctcaatcactacactctagttctgtcaaa
gatctgctatctctcggggtatgcgagagatgtgtattccgattggtatccgtggagcct
ttcgattccgatctgtcatcagtctcggcgtcgactctacggagctggctagaggaagct
tctgctgctgctgctgcttcgtcggagtctagctgctccagagtctgcattgtctgttta
ggtgtattgcagttcgttttctccgatgcgaaacaaacgctggcgagatcggagtgtggt
agtgactacgctgcaagggtaacggagttggtgaagcgggaaggtcatgagttcgatagc
tttggtttagaagtctctgtgccatcaaccgtcgtggagaatgagcgtgctgtcttgtta
taccttaaaggaaagtatgagactgaaggttgggtgcagagtgaaaagatttctgttaag
gatgccttgaaagttctagtcttggatccacttaaagcatcgttgggcgctaaatcagac
tcgagctctttccacatccgtttgacttactctatgacatcagatgaggttcaagatgcg
tctgaaacaactcatgaaagaaagaagaggaaaacagacgaagagaatggatcaacctct
atgtctgagaattcatttgaaaaggtttatgaaccatgcatcttgtcagttaattgcaac
aagatgcctatcttttttagtgggagatactttaaatactctagaaatgtaagtcaaaca
cgatggataattgatgatgaaagaatgggtgaagcgtctgttgaggagttaattggtgga
aacattcttccggcatgccttggggattcctacaagttccatgctgctggcagagaagat
attgatgtacggatgttgggttcaggtagacctttcttaatcgaggttcagaactcccgc
aaatgcccatctcagcaatcattgatggaaattgaagagaagataaacaactcagagaaa
aaactagtcggagttaaagatcttaaattcataggaagtcagtgttgggcaatgatgcgt
gaaggagaagcagagaaacagaagcaatatgctgcacttgtatggattgctcgtccactt
gaagagaaagatatcaactcaatttcttcactgatagaattgaaaatcttgcagaagaca
ccggtaagagtgcttcaccgccgaagtccgctggaacgtgaaaggactatacactggatg
aaagtggaaaagataaaaggaagctctcactactttctactgcatctatgcacacaggct
ggaacatacatcaaagagtttgttcatggagatcttggtcgtaccagtccaagcatggga
tcaattttaggatgcagggcggagataatacaacttgatgtcactgatgtcaaaatgggc
gattcttga
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