Raphanus sativus (radish): 108808482
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Entry
108808482 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04016
MAPK signaling pathway - plant
rsz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
108808482
04075 Plant hormone signal transduction
108808482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108808482
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108808482
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Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
bHLH_INO4
PUMA_CC
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
108808482
NCBI-ProteinID:
XP_056842435
UniProt:
A0A9W3BT05
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Position
1:complement(15212018..15214074)
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AA seq
593 aa
AA seq
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MTDYRLQPTMNLWTTDDNASMMEAFMSSADMSALWQSETATAPAPAPAMEIPAGFSQETL
QQRLQALIEGTQEGWTYAIFWQPSYDFSGASVLGWGDGYYKGEEDKGKTKQRSSPPPFST
PADQEYRKKVLRELNSLISGGAGPSDDAVDEEVTDTXWFFLVSMTQSFACGAGLAGRAFS
TANPVWVSGSDQLSGSGCERAKQGGVFGIQTIACIPSANGVVELGSTEKIRQSSDLVNKV
RMLFNLDGGAGLSWNLDPDQGENDPSMWINDPIGAPEPDNGAPSSSSQPFSKPIQFEIGG
NSSTVTENPNPIPKFNNDNSRELNFSTSSTSTLVKKPRAGEILSFGDEGKRCSINPDPTS
YSGQTQKRKKSLGLTDDKVLSFGGGESDHSDLEASVVKEVPEKRPKKRGRKPANGREEPL
NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVTKTESEKAQI
KNQLEEVKSELAGRKASAGGDLSTSSSVTAVKPVGMEIEVKIIGWDGMIRVESSKRNHPA
ARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGFRIYTQEQLRASLISKIG
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgacagattaccggctacaaccaaccatgaatctgtggaccaccgacgataacgcttct
atgatggaagctttcatgagctccgccgacatgtcagccttatggcaatcagaaacggca
acagctccggcgccggcgccggcgatggagattccggcgggatttagccaggagactctc
cagcaacggctacaagctctgatcgaagggacgcaggaaggctggacatacgctatattc
tggcagccgtcatacgatttctccggcgcctccgttctcggctggggtgacggctactac
aaaggagaagaagacaaaggtaagacgaagcagcgctcgagtccaccgccgttttcgact
ccggcggatcaggagtatcggaaaaaggtgttgcgtgagctcaattcgttgatctccggc
ggagctggcccgtccgatgacgccgtcgatgaggaggtgacggatacatagtggtttttc
ttggtttccatgacgcagagcttcgcttgcggtgctgggttggcgggtagagctttttcc
acggctaacccggtttgggtttccgggtcggatcagttatccgggtcgggttgtgagcgg
gctaagcaaggaggagtttttgggattcagaccatcgcgtgcattccgtcagctaacgga
gttgttgaactcgggtcaacggagaagatccggcagagttcggatctggtgaataaggtt
cgaatgcttttcaacttggacggtggagctggtcttagctggaatcttgatccggatcaa
ggcgaaaacgacccgtctatgtggattaatgacccgattggagcaccagaaccggataac
ggagctccgagttcaagctcccagcctttttccaagcctattcagtttgagattggtggt
aattcaagcaccgtaacagaaaacccgaacccgattccgaaattcaataacgacaactca
cgggaactaaatttctccacgtctagtacttctaccttggtgaagaaaccaagggccgga
gagatattgagtttcggcgatgagggtaaacggtgctccataaacccggatccgacttct
tattcgggtcaaactcaaaagagaaagaagtcacttggtttaaccgacgataaagttcta
tcattcgggggaggagaatccgatcactccgatctagaagcttcagtcgtcaaagaagta
ccagagaaacgtccaaagaaacgaggaagaaaaccagccaacggtagagaagagccgcta
aaccacgtggaagcagagcggcagagacgcgagaaactaaaccagcggttctacgcgtta
cgagcggttgtaccaaacgtctcaaagatggataaagcctctctgctcggagacgcgatc
gcttacatcaacgagctcaagtccaaggtgaccaagacggaatctgagaaagctcagatt
aaaaaccagctcgaggaggtgaagtcggagctcgccggaagaaaagcgagtgctggagga
gatctatcaacgtcttcttcagtaacagcggtcaaaccggtgggtatggagatcgaagtg
aagattatcggttgggacgggatgattagagtggaatcgagcaagaggaatcatcctgcc
gccagattgatgtccgcgttgatggatcttgagcttgaggtgaatcacgcgagcatgtct
gtggttaacgatctgatgattcagcaagcgacggtgaagatggggttcagaatctacacg
caggaacagctccgtgcgagtttaatttcaaagatcggttaa
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