Raphanus sativus (radish): 108808518
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Entry
108808518 CDS
T06014
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108808518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108808518
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108808518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
108808518
NCBI-ProteinID:
XP_018436151
UniProt:
A0A6J0JMA9
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All DBs
Position
1:complement(6664641..6671155)
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AA seq
1452 aa
AA seq
DB search
MSQDEEIVMRDVTNAGLCVGDRIGREAASQLDLEEALEASRYASHPYSTHPREWPPLIEV
GDTWELPSVLIERYNTAGGEGTALCGIFPEIRRAWASVDNSFFLWRFDKRDGQCPEYSGE
EQAICAVGLAKCRPGVFVEAIQYLLVLATPAELVLVGVCCIEGPDGRDPYAEISVQPLPD
YTISSDGVAMTCVSCTNKGRIFMAGRDGHIYELLYTTGSGWHKRCRKVCLTAGVGSMISR
WVVPNVFKFGAVDPVVEMVIDNERQILYARTEEMKLQAYVFGPNGEGPLKMVAEERNLLN
QKDVSQGNRQSAAAGRANKPTIVSISPLSMLESKWLHLVASLSDGRRMYLSTSSSGSSFS
GFNNHRQAPNCLKVVSTRPSPPLGAGVGLGFGAASLAGRTPNEDLSMKVDTAFYSVGTLV
LSDSSPPAMSSLLVVSKDSSAHSQVGGTSGSSSRSSRALREVVSSLPIEGRMLFVADVLP
SPDTAATVQSLYSELEYCGLEVSGESYEKACGKLWARGDLSTQHILPRRKIVLFTTMGMM
ELVFNRPVDILRRLLESNSPRSLLEDFFTRFGAGEAAAMCLMLAARIINFEDLISNIVAD
KAAEAFEDPRMVGMPQFDGSSGLSNTRTATGGFSMGQVVQEAEPIFSGAHEGLCLCTSRL
LFPIWELSVMSKKPSSDTMSADGLVICRLSTSAMHMLESKIRSLEKFLRSRRNQRRGLYG
YVAGLGGVTGSILYGTGTELGATERNMVRSLFGAYSNGAESANKRQRLPYSPAELAATEV
RAMECIRQLLLRSAEALFLLQLLSQHHVARLVQALDANLKQALVQLTFHQLVCSEEGDQI
ATRLISAVMEYYTGSDGRGTVDDISGRLREGCPSYFKESDYKFFLAVERLERAALAVDAE
EKESVAREAFSFLSKVPGSADLRTVCKRFEELRFYEAVVCLPLQKAQALDPDGDAFNDQI
DASIREHALAQRKQCYEIIANALRSLASSMLDEASRRQYICQIVHLGVQSTDRAFREYLY
TAMIELGLENELLEYGGPDMIPFLQNAGSHSASEVGVVSGSSPLGQSGTQISSNQAKYFD
LLAKYYVSKRQHMLAAHVFLRLAERRAIVTGDSPTLEQRRQYLSQAVLQAKNASNSDGLV
GSAQSACDSGLLDLLEGKLAVLQFQIKIRDKLEAIASDFESSVAMQDSEPELNGDSSDDA
SLANAANEKAMELSVELKSITQLYNEYAVPFELWEICLEMLYFANYSGDADSSIIRETWA
RLMEQALSQGGIAEACSVLKRVGSHIYPGDGVVLPLDVLCLHLEKAALERSERNEIVGDE
DIARALLAACKGAAEPVLNAYDRLLSNVAIVPSPNLRIRLLGSVLVVLLEWAMSVLSDRM
GQSPTRSSLILGGSFAHENKAVVNQGVRDKIATAANRYMTEVRRLTLPPTMTESVYAGFK
KLDESLLSPFSF
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagacgaggagattgtgatgcgtgacgtgacgaacgcgggtctctgcgtcggc
gaccgcattggccgagaagccgcatctcagctcgatctagaagaagctctagaagcttcc
agatacgctagtcatccctactccactcatcccagagagtggccaccgttgattgaagtg
ggtgacacttgggagttgccttctgtacttatcgagaggtataatacagcaggtggtgaa
gggacggccttatgtggaatttttccggagattcgacgggcttgggcttccgttgacaac
tctttcttcttgtggcgttttgacaagagggatgggcagtgtcctgagtatagcggggaa
gaacaggctatttgtgcggttggattagctaaatgtagacctggagtttttgttgaagct
attcaatatcttttggtgttggccactcctgctgagttggttcttgttggagtttgctgc
attgaaggacctgatggtagagatccttatgctgagatttcagtacagcctctgcctgac
tatacaatatcatcagatggagtagccatgacatgcgtttcatgtaccaataaagggcgt
attttcatggctggacgtgatggtcacatatacgagcttctgtatacaactggctcagga
tggcataaacgttgccgtaaggtgtgccttactgcaggtgttggtagtatgatctcgagg
tgggttgtaccaaatgtattcaagtttggagctgtagatcctgttgtggagatggtaatt
gataatgaaaggcagattttatatgcccgaactgaagagatgaaacttcaagcatatgtc
tttgggccgaatggggaaggccctctcaagatggttgcagaagaaaggaatctgttaaac
cagaaggatgtgagccaaggtaatcgacagtcagcagcggcaggtcgagctaacaagcca
actatagttagcatttcaccattgtccatgctcgaatccaagtggttgcatcttgttgct
tccttatcagatggtaggaggatgtatctctccacctcttcgagtggaagtagtttcagt
gggttcaacaaccaccgccaggctccgaactgtttaaaagtcgtttcaactaggccatct
cctccactgggggccggtgttgggcttggttttggagctgcatctcttgctggtagaact
ccgaatgaggatctctccatgaaggttgacacagcgttttattctgttggaacccttgtc
ctttcagattcatccccacctgctatgtcttctcttctggttgttagcaaagattcgagc
gcgcattctcaggttggcggcacttcagggtcaagttcaaggagttctcgggcgttacgg
gaagtagtctcgtccctacccattgaaggccgtatgctttttgtagcagatgtactcccc
tctcccgatactgctgctactgttcaatcattatactcagaacttgaatactgtggactc
gaagtctcgggagagtcttatgaaaaggcttgtggaaaactctgggccagaggtgatctt
tcgacccagcatattttgccaaggagaaagattgtcctttttaccaccatgggtatgatg
gaactggtctttaataggcctgttgatatcttgagaagacttctggaatctaattctcca
aggtcccttctggaagatttcttcacccgctttggagcaggcgaagcagctgcaatgtgc
ttgatgttggctgctcggataataaattttgaagatttaattagtaacattgttgccgat
aaagcagctgaggcttttgaggatccgagaatggtaggaatgccacaatttgatggcagt
agtggattgtcaaacactagaacagcaactggaggtttcagcatgggccaagttgttcaa
gaagccgaacccattttctcaggtgctcacgaaggcctctgcctttgcacgtcaagatta
ctttttcccatatgggagctttctgtgatgtctaaaaaaccaagttctgataccatgtct
gcggacggactggtgatttgtcgactttctaccagcgcgatgcatatgctggaaagcaag
attcgatcgttggagaaattcttacgatctagaaggaaccagagaagggggctttatgga
tatgttgctgggttaggaggtgtaactggctccattttgtatggtactggtacagagttg
ggagctacggaaaggaatatggttaggagcttgtttggagcctattccaatggagccgaa
tccgcaaataaaagacagcgcttgccatatagtcctgctgaattggctgccacggaggtt
agggcgatggagtgcattaggcagttgcttctcagatctgcagaagcccttttcctactc
caacttctttctcaacatcatgttgccagattagttcaggcgcttgacgcgaacttaaaa
caagctttggttcagttgacattccatcagttagtctgttctgaagagggtgaccaaatt
gcaacaaggctcatatctgccgtcatggagtattatactggctctgatggcaggggaaca
gtcgacgatattagtgggcgactacgtgaaggttgcccaagctacttcaaggagtcggat
tacaaattcttcttagctgttgaacgccttgaaagagctgctttagctgtagatgctgag
gagaaagagagtgttgctagagaggcgttcagtttcttgagtaaagtacctggatctgct
gatctcagaaccgtctgcaaacgttttgaggaattgaggttctacgaagctgttgtctgc
ttgcctttgcagaaggcgcaagcccttgatcctgatggcgatgctttcaacgaccaaatt
gatgcttccatcagagaacatgctcttgctcagcgaaaacaatgctatgaaattattgcc
aatgccttgcgatctctagctagttccatgctagacgaggcttcacgtagacaatatata
tgccagatcgttcaccttggtgtgcaatcaactgacagagcattccgggagtacctatac
acggccatgatagaacttggtcttgaaaacgagctcctggagtacggaggcccagatatg
ataccttttctacagaatgctggcagtcattctgcatcagaggttggggttgtttctgga
tcatctccgctgggtcagtcagggacacagatttcatcaaatcaagcaaaatactttgat
ctacttgcgaaatactatgtgtcgaagagacagcatatgcttgctgctcatgtgtttcta
cggcttgcagaaagacgcgcaattgttacaggggacagtcctactctcgaacaaaggcga
caataccttagtcaggcagtgttacaggccaagaatgcaagtaatagtgatggtttagta
ggttctgctcaaagtgcttgtgatagtgggttgcttgatctgcttgaaggaaaactcgca
gttcttcagttccaaattaagatcagagacaaacttgaagctattgcttccgatttcgag
tcctcggttgccatgcaggactctgagccagaacttaatggtgattctagtgatgatgcc
agcttagcaaatgcagcaaatgaaaaggccatggagctctccgtggaacttaaaagcata
acgcagttgtataatgaatatgctgtcccgtttgagctctgggagatctgtctggaaatg
ctctattttgccaactattctggcgatgctgactcaagcataataagagaaacatgggct
agactcatggagcaagctctttcacaaggcgggatagctgaagcatgttcagtgctcaag
agagtgggatctcatatatatcctggcgatggagttgttttaccgctcgatgttttgtgc
cttcacctcgagaaagctgcacttgagagatcagagaggaatgaaatcgtcggggacgaa
gacatagctcgagctctactagccgcctgcaaaggcgcagctgaacctgtgctcaacgct
tatgaccgtttattatccaatgtagccattgtaccgtctccgaatctaagaatccgtctc
cttggttcggttcttgtggtactcctggaatgggcaatgtctgtattatcagacagaatg
ggacagagtccaacaaggtcttcactgatattaggtggctcgtttgcgcacgagaacaaa
gccgttgttaaccaaggggtccgtgataagatcgcaaccgccgcaaacaggtatatgaca
gaggttaggagactgactctgccaccgacgatgacggagagtgtatacgcaggtttcaaa
aaacttgacgagtctcttttaagtccattctccttctga
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