Raphanus sativus (radish): 108808534
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Entry
108808534 CDS
T06014
Name
(RefSeq) formate--tetrahydrofolate ligase
KO
K01938
formate--tetrahydrofolate ligase [EC:
6.3.4.3
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00670
One carbon pool by folate
rsz01100
Metabolic pathways
rsz01200
Carbon metabolism
rsz01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
108808534
Enzymes [BR:
rsz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.3 formate---tetrahydrofolate ligase
108808534
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Motif
Pfam:
FTHFS
CbiA
Motif
Other DBs
NCBI-GeneID:
108808534
NCBI-ProteinID:
XP_018436165
UniProt:
A0A6J0JKI8
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Position
1:23246302..23248763
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AA seq
634 aa
AA seq
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MSSSSRKLQVVSPVPADIDIANSVEPLHIAEIAKDLNLSPLHYDLYGKYKAKVLLSAFDE
LKDREDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAYLDKKVVTCLRQPSQGPTFGIKG
GAAGGGYSQVIPMDEFNLHLTGDIHAITASNNLLAAAIDTRIFHEASQSDKALFNRLCPV
NKEGKRSFSDIMFRRLTKLGISKTSPEELTPEEVKKFARLDIDPDSITWRRVMDVNDRFL
RKITIGQGPEEKGMTRETGFDISVASEIMAVLALTTSLGDMRERLGKMVIGNSKAGEPIT
ADDLGVGGALTVLMKDAIHPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGP
GGFVVTEAGFGSDIGTEKFMNIKCRYSGLTPQCAIVVATVRALKMHGGGPDVVAGRPLDH
AYVSENVSLVEAGCVNLAKHISNTRSYGVNVVVAVNMFSTDTEAELNAVKKFSMDAGAFD
AVICSHHAHGGKGAVDLGIAVEKACQNVTQPLRFLYPLEISIKDKIEAIAKSYGASGVEY
SDQAEKQIEMYTQQGFSNLPICMSKTQYSFSHDASKKGAPSGFVLPIRDVRGSIGAGFIY
PLVGTMSTMPGLPTRPCFYEIDIDTVTGKVRGLS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatcatcaaggaagcttcaggtcgtttcgccagtccccgccgacatcgacata
gccaactccgtcgagcctctacacatcgccgagattgccaaagatctcaatctcagccca
cttcactacgatctctatggcaaatacaaagccaaggttctgttgtctgcgtttgatgag
cttaaagatcgagaagacggctactacgtagtcgtcggagggattactccaactcctctc
ggagaaggcaagtccaccaccactgttggcctttgccaagccctaggcgcttacctagac
aagaaggttgttacttgtcttcgccaaccctcacaaggacctacctttggtatcaaagga
ggtgcagctggtggtgggtacagccaggtgattcccatggatgagttcaatcttcatctc
actggagacatccacgccatcactgcctccaacaacctcttagctgctgccatcgacact
cggatcttccacgaggcgtctcagtcggacaaggctcttttcaacaggctgtgtcctgtg
aacaaagaagggaagcgtagcttcagtgatattatgtttaggaggttgactaagcttggg
atctccaagaccagtcccgaggagcttactcccgaggaggttaagaagtttgcgaggctt
gatatcgatcctgattctattacctggaggagagtgatggatgtgaatgatcggttcttg
aggaagatcactatcggtcagggacctgaggagaaagggatgactagagagacagggttt
gatatctctgtggctagtgagattatggctgtgttggctttgacgacctctcttggtgac
atgagagagaggcttggcaaaatggtgattggtaacagcaaggccggggaaccgattaca
gctgatgatctcggtgttggaggagcattgactgttctgatgaaagacgctattcacccc
acgctcatgcagacgctcgaaggaacgcctgtccttgttcacgctggtccctttgcaaac
atagctcatgggaactcgtctatagttgcggataagatcgcgttgaagctggtgggacct
ggtgggttcgtggtgacggaagctggttttggttctgacattggaacggagaagttcatg
aacattaagtgccgttacagcgggctgacgcctcagtgtgcgatcgttgtggccaccgtt
agggccttgaagatgcatggtggtgggcctgatgttgtcgccgggaggcctcttgaccac
gcctacgtgagcgagaatgtttccttggttgaagctggatgtgtgaatctagcaaagcat
atttcaaacactagatcatacggtgtgaatgttgttgttgctgtgaatatgttctcaacg
gatacagaagcagagctgaatgcagtaaagaagttttctatggatgctggtgcttttgat
gctgtgatttgttcccaccatgctcatggtggcaaaggagcggttgatcttggtattgct
gttgagaaagcttgtcaaaacgttactcagccacttaggtttctctacccattggagatc
agcatcaaagacaagattgaggccatagccaagtcgtatggagccagtggtgttgaatac
tcagaccaggctgagaagcagattgagatgtacactcaacaaggcttctccaaccttcct
atatgcatgtctaagacgcaatactcgttctctcacgatgcatcgaagaaaggagcacct
tcagggtttgtgttgcctataagggacgtaaggggaagcattggtgctggattcatatat
ccactggttggtacgatgagtacaatgcctggacttccgacaagaccttgcttctatgag
atcgacattgacactgtcactggaaaagttcgtggcctttcttga
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