Raphanus sativus (radish): 108808880
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Entry
108808880 CDS
T06014
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108808880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108808880
03036 Chromosome and associated proteins [BR:
rsz03036
]
108808880
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108808880
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108808880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
PilN
Motif
Other DBs
NCBI-GeneID:
108808880
NCBI-ProteinID:
XP_018436478
UniProt:
A0A6J0JLL3
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MFGSSNPFGQSSGTSPFGSQSQSMFGQTSNSSSSNPFAPATPFGGTSAPFGAQTGGSIFG
GTSTGVFGAPQASSPFGSTPTFGASSSPAFGNSTPAFGASPASSPFGGSSAFGQKPLGFS
TPQSNPFGSTTQQSQPAFGNSTFGSSTPFGAMSTPAFGASSTPSFGATSTPSFGASSTPA
FGATNTPAFGSNQPAFGATNTPAFGASPTPAFGSTGTTFGNTGFGASSTPAFGASATPAF
GASGAPAFGSSSTPAFGASSSPAFGASTTPTFGSSNTSSFSFGSSPAFGQSTSAFGSSAF
GSTPSPFGAQGAQASTPTFGSSGFGQSPFGGQQQGGSRAVPYAPTVEAETASGTPAGKLE
SISAMQAYKDKSHEELRWEDYQRGDKGGPLPAGQSAGNTGFGVSNAQPNPFSPSPAFGQT
PANPTNPFSGSTSTNPFAPQTPSIASSGFGTATSNFGSSPFGVTSSSNLFGSTSSTTTSV
FGSSSAFGTPTSSPLFGSSSTPGFGSSPSIFGSTPVQGANPAFGNTQSSNLFSSNPSLGQ
TGSAFGQTGSTFGQTGSTFGQTGSAFGQTGSAFGQFGQSSAPAFGQTNIFNKPSTGFGNL
FSSSSTLTTSSSSPFGQTMAAGMTPFQSSQPGQASNGFGFNNFGQTQAANATGNAGGLGF
FGQGNFGQTPAQPSSVVLQPVVVTNPFGTLPAMPQISINQSGTSPSIQYGISSMPVVDKP
VPVRISSLLTSRHLLQKRARLPARKYRPGDNGPKVPFFADDEENSSSTPKADALFIPREN
PRALVIRPVQQWSSRVKSTIPKDRPSAPPHENGKSPEIATDAANNNNDNGELGCAEERTH
PFVNGNQKTNGTTTTDHAGEKGLPSRTLGGHRAGKAEVVYENGADIEALMPKLRQSDYFT
EPSIRELAAKERADPGYCRRVRDFVVGRHGYGSIKFMGETDVRRLDLESVVQFNNREVIV
YLDESTKPAVGQGLNKPAEVTLLNIKCIDKKTGKQFTEGERVEKYKTMLKRKAEAQGAEF
VSFDPVKGEWKFRVEHFSSYKLDDVDDDEA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctcatctaatccttttggacagtcatctggtaccagcccgtttgggtcccaa
tcccaatctatgtttggtcagaccagtaattctagtagtagtaatcccttcgctccagca
acaccgttcggtggcacgtctgcaccttttggtgcacagacagggggttcaatatttggt
ggcacttcaaccggtgtttttggtgctcctcaagcctcctctccgtttggctccacccca
acttttggagcttcttcatcaccagcctttgggaattccactccggcttttggagcatcc
ccggcgtcttcaccttttggtgggtcttctgcttttgggcagaaacctctgggattctct
acgcctcagtcaaatccttttggaagcacaacgcagcaatcgcaacctgcatttggaaac
agtacttttggttcgtccacaccttttggtgccatgagcacgcctgccttcggtgcatca
agcacgccttcctttggggctacaagcacaccctcgtttggtgcatcaagcacgcctgcc
tttggtgccacaaacacgcctgcgtttggctcaaaccagcctgcttttggcgccacaaac
acacctgcatttggagcttcaccgactccagcctttggtagcactggtaccacgtttggc
aacactggctttggagcttctagcacccctgcttttggtgcatcagccactcctgctttt
ggtgcatcaggcgctcctgcatttggttcatcaagtactcctgcctttggggcatccagt
tctcctgcctttggagcatctactactcctacttttggttcatcaaacacctcatccttt
agttttggctcctctccagcttttggccagtccacatcagcgtttggcagcagtgcattt
ggctctacaccatctccgtttggagcccaaggtgcgcaggcttcaaccccaacatttggg
agttctggttttggtcaatcacctttcggtggtcaacaacaagggggcagtcgagccgtg
ccttatgcaccaacagttgaggcagagacagccagtggtacgcctgctggaaagttagaa
tctatttctgccatgcaggcatacaaagataaaagtcatgaggagctaaggtgggaagac
taccagcgaggagataaaggtggaccgcttcctgctggccagtctgctggaaatactgga
tttggtgtatcaaatgctcagccaaatcctttttctccatccccggcgtttggtcagaca
ccagcaaatccaacaaaccctttttcgggctcaacgtctactaatccttttgcccctcaa
accccatcaattgctagttcaggttttggaacggctacctcaaattttggctcctcgccc
tttggtgtaacatcttcatccaatctttttgggtcaacttcatcaactaccacatccgtc
tttggatcatcctccgcttttggaacaccgacctcatcaccgttatttggttcgtcgagc
actcctggatttggttcttctccatcaatatttggttcaactcctgttcagggggcaaat
ccagcatttgggaacactcagtcatctaatctgttcagctcaaacccctcccttggtcag
actggttctgcatttgggcagactggttctacatttggacaaactggttctacctttgga
cagactggttctgcctttggacagactggttctgcctttggacagttcggacagagtagt
gctcctgcatttggtcaaactaacatcttcaataaaccttcaactggatttggcaacttg
ttttcaagttcttcaacattaactacgtctagcagctctccctttggacaaacaatggct
gctggtatgacacctttccaatcatctcagccaggtcaagcgtcaaatggctttggtttc
aacaacttcggtcaaacacaagcagctaatgcaactggaaatgctggtggactgggattt
tttggtcaaggcaacttcgggcaaacgcctgctcagccgagctctgttgttttgcaaccc
gttgttgttacaaatccgtttggaacacttcctgctatgcctcagatctcaataaaccaa
agtggaacttcaccttcaattcaatatggaatctccagcatgcctgttgttgacaaacct
gttcctgtaagaatatcatctctgcttacttctcgacaccttttacaaaagcgggccagg
ttgccggcaagaaagtaccgtcctggcgacaatggtccaaaggttccattcttcgctgat
gacgaggagaactcctcgagtacaccaaaggcagatgctcttttcattccgagggagaac
cctagagctctagttatacgcccagttcaacagtggtcttcaagggtcaaatctacaatt
ccaaaggaccgccccagtgctccaccacatgaaaatgggaagagtccagaaatagctact
gatgcggcaaacaacaataacgataacggagaacttggttgtgctgaagaaagaactcac
ccatttgtcaatggaaatcagaaaacaaacggcacaacaacaacagaccacgctggagag
aaaggccttccctccagaacactaggcggacaccgagccggaaaagccgaagttgtttac
gagaacggtgcagatatcgaggcgcttatgcctaagctacgccaatccgattatttcacc
gagccaagtatccgggaactcgcggctaaagaacgggcggatccaggttactgcaggcgg
gttagagactttgtggtgggacgacacggttatgggagcataaagttcatgggagagact
gatgttcgtaggctagacttagaatctgtggttcagttcaataacagggaagtgattgta
tacctggacgagagcacgaaaccggctgttgggcaagggctgaataaaccggcggaggtg
acattgctgaatataaaatgtatcgataaaaagacagggaaacagtttactgaaggagag
agagtggagaagtataagacgatgcttaagaggaaagctgaggcacaaggagctgagttt
gtatcgtttgatcctgttaaaggcgagtggaagtttcgggtcgaacattttagttcctat
aagctcgacgatgttgacgacgatgaagcttaa
DBGET
integrated database retrieval system
