Raphanus sativus (radish): 108808894
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Entry
108808894 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108808894
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108808894
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108808894
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_SPT8
WD40_RFWD3
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
PGM_PMM_III
Motif
Other DBs
NCBI-GeneID:
108808894
NCBI-ProteinID:
XP_018436495
UniProt:
A0A6J0JLE9
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Position
6:complement(41523564..41525739)
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AA seq
481 aa
AA seq
DB search
MAKRNAGSNEGFRETFNREIGLSHPRSISRRICASEGIVKKLDLYGKLKGHEGCVNAVEF
SSTGDILVSGSDDRQIMLWNLLNGTRTLTYPSGHCENVFQTKFLPFTDDRTIITSGADGQ
VRLGQILENGKVETKRLGRHRGRVYKLALSPGDPNVFYSCAEDGFVQHFDIRTNSPTMVL
YSSPFTHGCRRHHSSSRIRLNSIATDPRNPHHLAVGGSDEYARVYDTRRVQPAPVCRHVV
PDPPVNTFCPRQLRETNSVHVTGLAYSQNGGELLVSYNDEHIYLFEKSMGFGSSPVGVSA
EKLEEMEEPQVYAGHRNAQTVKGVSFMGPNDEYVMSGSDCGHIFIWRKRGGKLVRAMVGD
RRVVNQLESHPHMTFLASCGIERSVKLWTPVSNDVVSLPENIEKVMESNRVGREDQSRVT
LTPEVVMHVLRLQRRQTSAFTERRYVLADVDDGDEENEARFISGLVAGEDVSSSERECNM
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacgaaatgcaggaagcaatgaagggttcagggagacatttaacagggagatt
ggcttgtctcatccgaggtcaatctcccgtcgaatctgcgcctctgaggggatagtgaag
aaactcgatctttacggaaagttaaaagggcatgaaggatgcgttaatgctgtcgagttc
agttccactggagacattctcgtttcgggttccgatgatcgacagatcatgctctggaac
ttgttgaacggaaccaggacgctgacctatccttccggccactgtgaaaatgtgttccag
actaagttcttacccttcacagatgaccggaccatcatcacatctggtgccgacggacaa
gtaagacttggtcagatcctggaaaatggaaaagtggagacgaaaagacttgggagacac
cgtggtcgcgtctacaagcttgctctttcccctggtgatcctaacgttttctacagctgc
gccgaagatggttttgttcaacattttgatatacgaaccaacagtcccactatggtttta
tactcctctcccttcacacacggatgcaggagacatcactccagcagcagaatcagactg
aactctatagccacagatcccaggaacccgcatcacctcgcggtcggtggttccgacgaa
tacgcgcgagtctacgacaccagaagagtgcagccagctcccgtgtgtcgccacgtcgta
ccggacccgcctgtgaacaccttctgtccacgtcaactccgtgaaaccaacagcgtccac
gtcacgggactggcctactcccaaaacggcggggagctgctggtctcttacaacgacgag
cacatctatctgttcgagaagagcatgggtttcggctcgtctcccgtcggtgtctccgct
gagaagctggaggagatggaagagccgcaggtgtatgcgggtcaccgcaacgcgcagacg
gttaaaggagtgagctttatgggtccgaacgatgagtacgtgatgagtggttcggactgt
ggtcatatctttatatggaggaagagaggaggtaagctcgtgcgggcgatggtgggtgat
aggcgagtggtgaatcagctcgagtctcacccgcacatgacgtttcttgcgtcttgcggg
attgaaagaagcgttaagctctggacgccggtgtcaaacgatgtcgtttctctccctgaa
aacatcgaaaaggttatggaatcgaacagagtaggaagagaagaccagtcgagggtgacg
ttgacccctgaagtagtcatgcatgttctcaggctacagagacgtcagacatcggctttt
acggagaggagatacgttttagctgacgtggacgacggtgatgaagaaaatgaagctcgg
tttatttcagggttagtagctggcgaggatgtgtcttcttcagaaagagaatgtaatatg
agctaa
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