Raphanus sativus (radish): 108808945
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Entry
108808945 CDS
T06014
Name
(RefSeq) protein argonaute 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108808945
03036 Chromosome and associated proteins [BR:
rsz03036
]
108808945
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108808945
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108808945
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108808945
microRNA pathway
RISC loading complex
108808945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
108808945
NCBI-ProteinID:
XP_056845256
UniProt:
A0A9W3C198
LinkDB
All DBs
Position
6:complement(45432830..45438599)
Genome browser
AA seq
923 aa
AA seq
DB search
MDSTTGNGAELESANGSGVTDALPPPPPVIPPNVEPVRIKTEIAEKKNLRVPMARNGFGS
KGQKIPLLTNHFKVNVANLQGHFYHYSVALFYDDGRPVEQKGVGRKILDKVHETYHSDLD
GKEFAYDGEKTLFTFGALPSNKMDFSVVLEEVSSTRTNGNASPNNGNEEQSDGDRKRLRR
PNRSKSFRVEISYAAKIPLQALANAMRGQESEQSQEAIRVLDIILRQHAARQGCLLVRQS
FFHNDPSNCEPVGGNILGCRGFHSSFRTTQGGMSLNMDVTTTMIIKPGPLVDFVIANQGV
NDPFTVDWSKAKRTLKNLRIKVSPSNQEYRITGMSDKPCREQMFEYRPRNAPKNENGESE
TVEISVYDYFLRERNLELQYSADLPCINVGKPKRPTYIPLEHCTLIPLQRYTKALNTFQR
SALVEKSRQKPQERMNVLSKALKVSNYDTEPLLRSCGISISSNFTQVEGRVLQAPKLKMG
RGDELFPRNGRWNFNNKQFVEPTKIDKWAVANFSARCNVRQLVDDLMRIGGMKGVEIAPP
FDVFEEGHQFRRAPTLIRVEKMFEEIQSKLPGAPQFILCLLPERKNCDIYGPWKKKNLTE
YGIVTQCMAPVRQPNDQYLTNCLLKINAKLGGLNSLLSVERTPAFTVISKVPTIILGMDV
SHGSPGQSDVPSIAAVVSSRQWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKEL
LVDFYASSGKRKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKLLDENWNPKFLLLVAQ
KNHHTKFFQTSSPDNVPPGTIIDSKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEINF
SPDELQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGVTA
PGPVSVAQLPKLKDNVANSMFFC
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggattctactaccggtaatggagctgaacttgaatcagcaaatgggagtggtgttact
gatgcattgccgcctcctccaccagtcatacctcccaatgttgagccagtccggattaaa
accgaaattgctgagaagaaaaacctgagagtccctatggctcgtaacgggtttggatca
aagggtcagaagataccgcttttgactaatcatttcaaagtcaacgtcgctaatcttcaa
ggacatttctaccactacagtgtggcgctcttttatgatgatgggcgtcctgttgaacaa
aaaggtgttggaagaaagatcctagacaaggtccatgagacttaccattctgatcttgac
ggtaaagagtttgcctacgatggagaaaagacattgtttacgtttggagctttgcctagt
aacaagatggacttctctgttgttcttgaggaagtatcttcaaccaggactaatggaaat
gcaagccccaataatgggaacgaagagcaaagtgatggtgataggaaaagactgcgtcga
cctaaccgctccaaaagctttagagtcgagatcagttatgccgccaagatccctctacaa
gctcttgctaatgctatgcgaggccaggaatctgagcagtcacaggaggccattagggtt
ttggatatcatcttacgtcaacatgctgctagacaaggctgccttcttgtgagacaatcg
tttttccacaatgacccgagtaactgcgaaccagttggtggtaacatcttgggatgtaga
ggattccactcgagtttccggacaacacagggtggaatgtcccttaacatggatgttaca
accacaatgataatcaagcctggtccgcttgttgattttgttattgctaaccaaggcgta
aacgatccgtttactgttgactggtctaaggcgaaaaggacgctcaaaaaccttaggatt
aaagtcagcccctcaaaccaggagtacaggatcaccggaatgagcgacaagccttgcagg
gaacagatgtttgaatataggccaaggaacgcaccgaagaatgaaaacggagagtctgaa
actgttgaaatatcggtgtatgactacttcctcagagagcggaacctggagctgcagtat
tctgcggatttgccgtgcatcaatgttgggaaaccaaagcgtccgacctatattcctctc
gagcactgcactttaattccccttcagaggtacacaaaagcgctgaacactttccaaaga
tctgcccttgtggagaaatctagacagaaaccccaggagaggatgaatgttctgtccaaa
gcacttaaagtgagcaactatgacactgaacctctcctgcgttcctgtggcatttctatt
agctccaactttactcaagtggagggacgtgtcctgcaagctcctaagctgaaaatgggt
cgcggagatgaactgtttccacgaaatggacgctggaatttcaacaacaagcaatttgtt
gagccaaccaagattgacaaatgggctgttgcaaatttctctgctcgctgtaatgtacgc
caactggttgatgatctaatgcgaattggtggaatgaaaggagttgaaatcgctcctcct
ttcgatgtatttgaggaaggtcatcagtttcgccgtgctcctactcttattcgtgtggag
aagatgtttgaagagatccagtctaagctccctggcgctccacagttcattctttgccta
ctccccgagaggaagaactgtgacatttatggcccatggaagaagaaaaatctaaccgaa
tacggcattgtcactcaatgcatggctccagtgaggcaaccgaatgatcaatatcttaca
aactgtcttctgaagatcaacgcaaagttgggaggcttgaactccttgttaagcgttgag
cgaactccggccttcacggtcatctccaaggttccaaccatcatccttggaatggatgtt
tcgcatggatctcctggacagtctgatgtcccctccattgctgctgtggtgagttctagg
cagtggcctctaatctccaagtacagagcatctgttcgcactcagccttccaaggctgag
atgattgagtccctcgtgaagaaaaatggaactgaagacgatggcattatcaaggagtta
ctggtagatttctatgccagctctggtaagagaaagcctgagcatatcataatcttcagg
gatggtgttagtgaatctcagttcaaccaggttctgaacattgaactcgaccagatcata
gaggcatgcaagcttctagatgagaattggaacccgaaattcctcttgctggtggctcag
aagaatcaccacaccaagtttttccagacgagctctcccgacaacgttcccccagggaca
ataatcgacagcaaaatctgtcacccgaagaacaatgacttctatctctgtgcgcacgct
ggaatgattggaacaactcgtcctacacattaccatgtcctgtatgatgagattaatttc
tcacctgatgaactccaagaactagtccactccctctcttacgtgtaccaaagaagcacg
accgccatttctgttgttgcaccgatctgctatgcgcacttggcagctgctcagctagga
acgttcatgaagttcgaagatcagtctgagacgtcctcaagccatggtggcgtgacagct
ccaggaccagtctctgttgcgcagctcccgaaactcaaagacaacgttgccaactccatg
ttcttctgttag
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