Raphanus sativus (radish): 108808958
Help
Entry
108808958 CDS
T06014
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 2 isoform X1
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
108808958
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
108808958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
GH32_BT1760-like_C
Motif
Other DBs
NCBI-GeneID:
108808958
NCBI-ProteinID:
XP_018436571
UniProt:
A0A9W3CKY7
A0A6J0JNH3
LinkDB
All DBs
Position
6:complement(604131..607521)
Genome browser
AA seq
717 aa
AA seq
DB search
MRDLIRAYFSRRTLVSIYNLFFFLSNKLLTSFPLSLIMPKSDTGAESESEAVPLLDLSAP
SSPISFPIKSLQDLKSRSYFDSFHFQFNRSTVPLRRDLPNNRPRVLVCHDMKGGYVDDKW
IQGCENDAGYAIWHWYLMDVFVYFSHSLVTIPPPCWTNTAHRHGVKVLGTFITEWDEGKA
TCREMLATKESAQMYAERLAELSTSLGFDGWLINIENEIDEEQISNLKEFVSHLTKVLHL
SAPGALVIWYDSVTVCGDLEWQDQLNEKNKPFFDLCDGIFMNYTWKESYSKLSAEVAGDR
KYDVYMGIDVFGRGSFGGGQWTVNTALDLLKRNNVSAAIFAPGWVYETAQPPNFHSAQNK
WWSLVEKSWGIVQTYPQVLPFYSDFNQGFGYHVSLEGRQLSDAPWYNISCQSLQPLLEFK
EDNTDIIQVTVDAREASYNGGGNIVFKGRLEGDVYFTARLFKPLLHLSSSPITISYSVKS
DHETSKFGLLLCFSSPSRETKSILVAPKETTTRLDHMFLKCLVTSEQTVSEWTVHETSLV
MDGHTLTEISAFCYRTENSTKTSEYVALLGHISIKDHHVQLLQQNLVSLPPASSWVIEAR
NLELVPGNSGSKILRVKLEWRQKQLEDSVSPVYNVYAENVKSTDVLRSRKVLEKPRSKRV
FLGISHIPAYYVSELVLDSDVKGVSFVVQPCCEDGSWMKVDDSPNLLVNLEGLPQVA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaccttattcgcgcctatttctcacgaagaacactcgtctctatctacaacctc
ttcttcttcctctccaataagctcctcacttcattccctctctccctcatcatgcccaaa
tccgacaccggcgcagaatccgagtccgaggccgtaccgctgctcgatctatctgcaccg
tcgtcaccgatctcattcccgatcaaatcactccaagacctgaaatcacgttcttacttc
gactcgttccacttccagttcaaccgctccaccgtccctctccggcgagacttacctaat
aatcggccgagggttttagtgtgccacgatatgaaaggaggttacgtagacgataagtgg
atccaagggtgtgaaaacgacgccggatacgcgatctggcattggtatttgatggatgtg
ttcgtttacttctctcattctctggtgacgattcctcctccttgttggaccaatacagct
cataggcatggcgttaaggtgttggggactttcattacagaatgggatgaaggtaaagct
acctgcagagagatgcttgccactaaggagtctgctcagatgtatgctgagcgtttggct
gagctttctacttctctaggtttcgatggatggctgataaatatagagaacgaaattgat
gaagaacaaatttctaatttgaaggaattcgtcagccatctaacaaaagtcttgcattta
tctgcgcctggggctttggttatttggtacgacagtgtcactgtttgtggcgatcttgaa
tggcaagatcagttgaatgagaagaacaaaccattctttgacttgtgcgatggtatcttc
atgaactatacatggaaggagagctactctaaactatcagctgaagttgcaggggacaga
aaatatgatgtctacatgggaattgatgtctttggtcgcggctcttttggtggtgggcaa
tggactgttaatactgcacttgatttgctgaagagaaacaatgtatcagctgccattttc
gctcccggatgggtatatgagactgcacaacctcctaattttcattcagctcagaataaa
tggtggtcacttgttgagaagtcatggggaatagtccaaacatatccacaagtcttgcct
ttctactcggatttcaatcagggatttggttaccatgtttcactcgagggtcgccagtta
tctgatgctccatggtacaacatttcttgccaaagtctccagccactcctagagttcaag
gaagacaacactgatatcattcaggtcactgttgatgcacgagaggcatcttataacgga
ggagggaacattgtattcaaaggaagactcgagggagatgtgtatttcacagcaaggctc
tttaaacctcttctccacctttcttcttcccccatcacaatctcctactctgtgaaatca
gatcatgagacttctaaatttggactcctgctttgcttctcatccccatcacgcgagact
aaatccatacttgtagcaccgaaagaaacaaccaccagattagatcacatgttcttgaag
tgcctcgtcacatcagagcagactgtatccgagtggacggtacacgagacaagccttgtc
atggatggacacacactgactgaaatctctgccttttgctacagaacagagaactcgaca
aagacatctgagtacgttgcgttgctcggtcacatctcaatcaaagatcatcatgttcag
ctcctccagcaaaacctcgtttccttacctccagcgtcatcatgggtcattgaggctcgt
aacttagagcttgtaccgggtaattccggttctaagatcctcagggttaagttagaatgg
agacagaaacagcttgaagattctgtttctccagtgtataatgtatatgcagagaatgtg
aagtcaactgatgtactaagatcgaggaaggttctggagaaaccaagaagcaagagagtg
ttcctcggaatctctcacattccggcgtattacgtttcggaactggtgctagattcggac
gtgaaaggagtcagctttgtagttcaaccgtgttgtgaagatggttcatggatgaaggta
gatgattcccctaaccttcttgtgaacttggaaggtctcccgcaagttgcttga
DBGET
integrated database retrieval system
