Raphanus sativus (radish): 108809068
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Entry
108809068 CDS
T06014
Name
(RefSeq) replication factor C subunit 3 isoform X2
KO
K10756
replication factor C subunit 3/5
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03030
DNA replication
rsz03410
Base excision repair
rsz03420
Nucleotide excision repair
rsz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108809068
03410 Base excision repair
108809068
03420 Nucleotide excision repair
108809068
03430 Mismatch repair
108809068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsz03032
]
108809068
03036 Chromosome and associated proteins [BR:
rsz03036
]
108809068
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108809068
DNA replication proteins [BR:
rsz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108809068
DNA Replication Termination Factors
ELG1-RFC complex
108809068
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108809068
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108809068
Check point factors
HRAD17(Rad24)-RFC complex
108809068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
Rad17
Sigma54_activ_2
ABC_tran
AAA_22
DUF815
Mg_chelatase
AAA_23
RuvB_N
AAA_29
RsgA_GTPase
AAA_5
AAA_16
AAA_24
T2SSE
POC1
AAA_2
ATPase_2
nSTAND3
TsaE
Motif
Other DBs
NCBI-GeneID:
108809068
NCBI-ProteinID:
XP_018436694
UniProt:
A0A6J0JPJ0
LinkDB
All DBs
Position
6:complement(15215788..15218270)
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKSLDKVIVHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLKQIYG
PSADKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSR
CLNVRINAPSQEEIVKVLEFVAKKETLQLPHGFAARIAEKSNRSLRRAVLSLETCRVQNY
PFANNQVISPMDWEEYVAEISTDMLKEQSPKSLFQVRGKVYELLVNCIPPEVILKRLLHE
LLKKLDSELKLEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKNFLISTFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggtcgacaagtacaggcctaaatcgctagataaggtcatcgttcacgaagat
atcgctcagaatctcaagaaattggtaacggagcaagattgtccgcatttgctgttctat
ggaccgtctggttcgggtaagaaaaccctaatcatggcgcttctcaagcagatttatggt
cccagtgctgacaaggtgaaagtggagaacagggcatggaaagtcgatgctgggagtaga
actattgatctggagctcactacgttatcaagcaccaatcatgtggaacttactccaagt
gatgcaggctttcaggaccgatacatcgttcaagagatcattaaagaaatggccaagaac
agacctattgacaccaaaggaaagaagggattcaaggtgttggtactaaatgaagtagac
aagctctcacgagaagctcaacactctctgcggagaacaatggagaagtatagctcatcg
tgccgtctcatcttatgctgtaacagttcttcaaaggttacagaagccatcaagtctcgt
tgtctcaatgtccggataaatgcaccttcccaggaagagatagtgaaagtgttggagttc
gttgcgaagaaagaaactctgcaactgccacacggttttgctgctcgtattgctgaaaaa
tcaaaccgcagtcttagaagagctgttttgtcacttgagacctgtcgtgtccaaaactat
ccgttcgcaaataatcaagtgatatctccaatggattgggaagagtatgttgctgaaata
tcaactgacatgttgaaggaacagagccctaaaagtttgtttcaggtgcgtgggaaggta
tatgagttgctagttaattgtattccacctgaagtcatactgaagagacttcttcatgaa
ctgctgaagaaactggactcagagctgaagcttgaagtctgccactgggccgcatattat
gaacatcggatgagattgggtcagaaagccatatttcacatagaagcatttgtggccaag
tttatgagcatatacaaaaacttcctcatttcaacatttgggtag
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integrated database retrieval system
