Raphanus sativus (radish): 108809095
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Entry
108809095 CDS
T06014
Name
(RefSeq) AP-1 complex subunit gamma-1
KO
K12391
AP-1 complex subunit gamma-1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108809095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108809095
Membrane trafficking [BR:
rsz04131
]
Endosome - Golgi transport
Others
AP-1 complex
108809095
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GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
INTS1_R4
HEAT_2
Cnd1
CA109-like
Pro-rich_19
Motif
Other DBs
NCBI-GeneID:
108809095
NCBI-ProteinID:
XP_018436728
UniProt:
A0A6J0JMD1
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Position
1:10614457..10620101
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AA seq
872 aa
AA seq
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MNSIFSGTRLRDMIRSIRACKTAAEERGVVRKECADIRASINENDPHDRHRNLAKLMFIH
MLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQY
VVGLALCALGNICSAEMARDLAPEVERLIQFRDPNIRKKAALCSTRIVRKVPDLAENFVN
AASSLLKEKHHGVLITGVQLCYELCTINDEALEYFRKKCTEGLIKTLRDITNSAYQPEYD
VAGITDPFLHIRLLKLLRVLGHGDADASDLMTDILAQVATKTESNKNAGNAVLYECVETI
MAIEDTSSLRVLAINILGRFLSNRDNNIRYVALNMLMKAIAFDDQAVQRHRVTILECVKD
PDASIRKRALDLVSLLINENNVKQLTKELIDYLEISDEDFKEDLSAKICSIVEKFSPEKI
WYIDQMLKVLSEAGKFVKDDVWHALIVVISNASELHGYTVRALYKAVLTYSEQETLVRVA
IWCIGEYGDLLVNNVGMLGIEDPITVTESDAVDVIEEAITRHNSDMTTKAMALVALLKLS
SRFPSISERIKDIIVKQKGSLLLEMQQRAIEFNSIVDRHKNIRSSLVERMPVLDEATFNV
RRAGSLPASVSTMAKPSVSIPNGVAAAPLVDLLDLGSDDIMAAPSSSGADFLQDLLGVDL
GSSPAQSGAAPGPKAGADLLMDILSIGTPSPAQNNTSSIDLLSTAAINNSPSTALDTLSS
PAPPHVATTASAGGMFDLLDGLSPSPSKEATNGPAYPPIVAYESSTLKIEFTFSKPSENP
QTTNVQATFINLSPNNFTDFIFQAAVPKFLQLHLDPASSNTLPASGNIMQNLKVTNSQHG
KKSLVMRMRIGYKVNGKDVLEEGQINNFPRGL
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaattttttccggtactcgtctaagggacatgatcagatccataagagcgtgc
aaaacagctgcggaggagcgtggcgttgtgaggaaagagtgtgctgatatcagagcgtcc
atcaatgagaacgaccctcacgataggcaccggaacctcgccaagctcatgttcatacac
atgctgggctacccgacgcattttgggcagatggagtgtttgaagcttattgcgtctcct
gggttcccggagaagaggattggttatctcgggctcatgttgcttcttgatgagagacag
gaagtgttgatgctcgtcaccaattcattaaaacaagatcttaaccacacgaaccagtat
gttgtagggcttgccctctgtgctttagggaatatttgttctgcagaaatggctcgtgat
cttgcgcctgaagtagaaagattgatccagtttcgtgaccctaatatccgtaagaaggcg
gcactttgctccactagaatagtgaggaaagttccagatcttgcagagaactttgtaaat
gctgcttcttccttgcttaaagaaaagcatcatggggttcttattacaggagttcaactt
tgttatgaactatgcacgatcaatgatgaggccctagaatacttcagaaagaaatgcacg
gaggggctgataaaaactttgagggatattactaatagtgcatatcagcctgagtatgat
gttgcagggatcacagatccttttcttcacatacggttacttaagctcctacgtgtttta
ggccatggtgacgctgatgctagtgatttgatgactgatatacttgcccaggtggccaca
aaaactgaatcaaacaaaaacgcaggaaacgccgtactctatgagtgtgttgaaacaatc
atggccattgaagataccagtagtttgcgtgtgcttgctatcaatatcttgggaagattc
ttatctaaccgtgacaacaatatcagatatgttgcattaaacatgctgatgaaagcaatc
gcgtttgatgatcaagcagtgcaaaggcacagagttacaatcttagaatgtgttaaggac
ccagatgcttccatcaggaaaagagctcttgacctcgtgtctcttttgataaatgagaac
aatgtcaaacaactgacaaaggagctgattgattatttggaaattagcgatgaagatttt
aaggaggatcttagtgcgaaaatttgttctatcgttgaaaagttttctccagagaaaatc
tggtacattgatcagatgcttaaggttctttcggaggctgggaagtttgtgaaagatgat
gtgtggcatgcactgattgttgtcataagcaatgcatcagagcttcatggatatacagtc
agagcattatacaaagcagtcttgacatattcagaacaggagacccttgtccgagtggcg
atttggtgcattggggaatatggtgatttgctggttaacaatgtgggtatgcttggtatt
gaagatccaataacggtaacggaaagtgatgcagtggacgtaatcgaggaagccattact
cgccataactcagatatgactacaaaagcgatggcattggttgctctgctgaagctgtca
tcccgctttccttctatctcagagaggattaaagatataattgtgaagcagaaagggagc
cttctccttgaaatgcagcagagagctattgaattcaattctattgttgacaggcataaa
aatatcaggtcttctctggttgagagaatgccggtgctagatgaagctaccttcaatgtg
aggagggctggctctttgcctgcgtcagtttcaacaatggccaaaccttcagttagtatt
ccaaatggtgttgctgcagctccactagtggatttgctggatctgggttctgacgatatc
atggctgcacctagttcatctggtgcagatttccttcaggatcttcttggtgttgactta
ggatcatcgccggcacaatctggtgcagccccgggtccaaaagccggcgcagatctgttg
atggatattttatcaattggaacaccttctccggcgcaaaacaacacatcatcaattgat
ttgttatcgacagctgccattaacaatagtccttctactgccctagacacactctcttca
ccagctccacctcacgtagcaacgactgcttctgctggtggtatgtttgatttgttagat
ggtctttccccaagcccatcgaaggaagcaaccaatggtcctgcatatccacctattgtt
gcatacgagagcagcaccttgaagattgagttcaccttctcaaagccatcagagaaccca
caaacaacaaatgtgcaagccacttttataaatctatctcctaataatttcacagatttt
atcttccaggctgctgttccaaagttcctccagctgcacttggatccagcaagcagtaac
acactcccggcaagcggtaacattatgcagaatctgaaagtcactaacagccagcacgga
aagaaatctcttgtgatgcgcatgaggattgggtacaaagtaaatggaaaagatgtactg
gaggaaggacagatcaacaacttccctcgtggcttgtga
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