Raphanus sativus (radish): 108809161
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Entry
108809161 CDS
T06014
Name
(RefSeq) cellulose synthase-like protein D3
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rsz01003
]
108809161
Glycosyltransferases [BR:
rsz01003
]
Polysaccharide
Structural polysaccharide
108809161
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
zf-UDP
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
108809161
NCBI-ProteinID:
XP_018436796
UniProt:
A0A6J0JP40
LinkDB
All DBs
Position
6:complement(3084685..3090193)
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AA seq
1160 aa
AA seq
DB search
MASNNHFTNSRSNLSTNSDAAEAAARNQQHQQPSGVTFARRTSSGRYVNYSRDDLDSELG
SVDFTNYTVHIPPTPDNQPMDPSISQKVEEQYVSSSLFTGGFNSVTRAHLMDKVIDSETS
HPQMAGAKGSSCAVPGCDVKVMSDERGQDLLPCECDFKICRDCFVDAVKTGGGICPGCKE
PYRNTDLTDLAENNNKSVQKQQRPMLPPPPSSSGGGFGSKMERRLSLMKSTKSGLMRSQT
GDFDHNRWLFETSGTYGYGNAFWTKDGNLGSEKDGHGMGPQDLMSRPWRPLTRKLQIPAA
VISPYRLLIFIRIVVLALFLMWRIKHQNPDAIWLWGMSVVCELWFAFSWLLDQLPKLCPI
NRATDLNVLKEKFETPTPSNPTGKSDLPGLDMFVSTADPEKEPPLVTSNTILSILAADYP
VEKLACYVSDDGGALLTFEAMAEAASFANIWVPFCRKHNIEPRNPDSYFSLKRDPYKNKV
KADFVKDRRRVKREYDEYKVRINGLPDSIRRRSDAYHAREEIKAMKEQRQNREDEIVEPV
KIPKATWMADGTHWPGTWLNSSPDHSRSDHAGIIQVMLKPPSDEPLHGVSEGFLDLTDVD
IRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSQALREG
MCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLMGPVYVGTGCLF
RRIALYGFDPPRSKEHSPGFCSCCFRRKQKKSRVAEENRSLRMSGGGGDSDDDEEMSLSL
VPKKFGNSTFLIDSIPVAEFQGRPLADHPAVQNGRPPGALTIPRELLDASTVAEAIAVIS
CWYEDKTEWGSRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLH
QVLRWATGSVEIFFSRNNAFLASPRMKILQRIAYLNVGIYPFTSIFLIVYCFLPALSLFS
GQFIVQTLNVTFLIYLLIISITLCLLALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAV
IQGLLKVVAGIEISFTLTSKSGGDDVDDEFADLYVVKWTSLMIPPITIMMVNLIAIAVGF
SRTIYSVIPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGKTPTIVYVWSGLVAITISLL
WVAVNPPAGSTQIGGSFSFP
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaataatcatttcacaaacagtagatccaatctatcaacaaactccgacgcc
gccgaagcagccgccaggaaccagcagcatcagcagccgtccggcgtcacattcgctcga
cgaacttcctccggacgctacgtcaactactcgagagatgacctcgacagcgaactcgga
agcgtcgatttcaccaactacaccgtccacatccctccgactccagacaaccagcccatg
gacccgtccatctcccagaaggtcgaggagcagtacgtgtccagctccctgttcaccgga
ggtttcaacagcgtcacgcgcgctcatctcatggacaaggtcatcgactccgagaccagc
catccgcagatggccggcgcgaaaggctcctcctgcgcggttcccggatgcgatgtgaag
gtgatgagcgacgagaggggtcaggaccttctcccttgcgagtgtgatttcaaaatctgt
agggactgttttgtcgacgcggtgaaaactggcggcgggatctgtcccgggtgtaaggag
ccttataggaacacggatctgactgatttggctgagaacaacaacaagagtgtgcagaag
cagcaacggcctatgcttcctcctccaccttcttcttctggtggtggttttggttcgaag
atggagaggagattgtcgttgatgaagtcgactaagtccggtttgatgaggagtcaaacc
ggggattttgatcataaccggtggttgtttgagacgagcgggacttatggttacggtaat
gctttttggacaaaggatgggaacttaggtagtgagaaggatggtcacggtatggggccg
caagatcttatgagcagaccgtggagaccgcttactcggaagctccagattcctgctgct
gttattagtccttacaggcttttgatatttatcaggattgttgtgcttgcgctgttcttg
atgtggaggattaagcatcagaacccagatgcaatatggctatgggggatgtctgtggtt
tgcgagctttggtttgctttctcttggcttcttgatcagcttccaaagctgtgtcctatc
aaccgagctacagatcttaacgttcttaaagagaagtttgagacccccacaccgagtaac
ccgacagggaagtctgatctccctggactagacatgtttgtatcaacagcagatccggag
aaagaacctcctctcgtcacttccaacaccatcttgtccatcctcgctgctgactaccct
gttgaaaagctagcttgctatgtctcagacgatggaggagcgcttctgacgtttgaagcc
atggctgaagctgctagtttcgcaaacatatgggttcctttctgtcgtaaacacaacatc
gagccgaggaatccggattcgtattttagtctgaagagagatccttacaagaacaaggtg
aaggctgactttgtgaaggataggagaagggtgaagcgtgagtatgatgagtacaaggtt
cggatcaacggcttgcctgactctatcaggcgacgttctgatgcttatcacgcgagggaa
gagattaaggccatgaaggagcagagacagaacagagaggatgagatcgtggagccggtt
aagattcctaaggctacgtggatggctgatggtactcattggcctggaacttggttaaac
tcttctcctgatcattctcgtagtgaccatgctggtatcattcaggtgatgttgaagcct
cctagtgatgagccattgcatggagtatccgaagggttcttagatcttacagatgtcgac
atccgtcttcctctgctggtctacgtctctcgtgagaaacgaccaggctatgaccacaac
aagaaagcaggagccatgaatgcattggtccgagcatccgcaatcatgtccaacggtcca
ttcatattaaatctcgactgtgatcactacatatacaactctcaagctctgagagaagga
atgtgcttcatgatggaccgtggcggcgacaggctctgctacgttcagttcccgcaacgg
ttcgaaggcattgacccatctgatcggtatgctaatcacaacactgtcttcttcgacgtc
aacatgagagctctcgatggtttgatgggtccggtttacgtcggaacgggttgtctcttc
agaagaatcgccttgtacggattcgatccgccgcggtctaaagaacacagtcctggattc
tgtagctgttgcttccgccgcaagcaaaagaagagccgtgtcgctgaagaaaacagatct
ttgagaatgagtggtggtggtggcgactctgatgatgatgaagagatgagtctttctttg
gttcctaaaaagtttggaaactcgacgttccttatagattcgatccctgtggcagagttc
caaggccgtccgctcgcagaccacccggccgtgcagaacggacggcctcctggagctctc
accatccctcgtgagcttctcgatgcgtctacggtagcggaagctattgcagtaatctca
tgctggtacgaagataaaaccgagtgggggtctaggatcggttggatctacgggtctgtg
accgaagacgttgtgaccggttatagaatgcataaccgaggatggaagtcggtttactgc
gtgacgaaacgtgatgccttccgtggcacggctcctatcaacttgacggataggctccac
caggttctgcgttgggctaccggctcggtggagatcttcttctcgagaaacaacgccttt
ttggccagcccgaggatgaagatcctccagagaatagcttacctcaacgtcggaatctat
cctttcacgtcgatcttcctcatcgtctactgcttcctccctgcgctctcgctcttctcg
ggacagttcatagtccaaacgctcaacgtcacgttccttatttacctcttgatcatctcc
attacattgtgtttactagctctcctcgagatcaaatggtcaggaatcgaattggaagaa
tggtggagaaacgagcagttctggctcattggagggacaagcgctcatctagctgctgtc
atccaaggcttgctcaaagtggtggctggaatcgagatctctttcacgttgacgtctaaa
tcaggaggagacgacgtggacgacgagtttgcggatctttacgtagtgaaatggacgtct
ctgatgatcccaccgatcacgatcatgatggtgaatctgatagctatcgctgtggggttc
agcagaacgatatacagtgtgattccgcagtggagtaagttgataggaggagtgttcttt
agcttctgggtgttggctcatctttatccttttgctaaagggcttatgggaagaagagga
aagactccgaccattgtttatgtttggtcgggacttgttgccatcactatttcgctgctt
tgggttgctgttaatccgcctgctggttctactcagattggaggatcgttctcgtttccg
tga
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