KEGG   Raphanus sativus (radish): 108809453
Entry
108809453         CDS       T06014                                 
Name
(RefSeq) SEC12-like protein 2 isoform X1
  KO
K14003  prolactin regulatory element-binding protein
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108809453
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108809453
Membrane trafficking [BR:rsz04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    108809453
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_MABP1-WDR62_1st EIF3I Beta-prop_IFT140_1st Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_RIG_1st DUF7027 Phage_Gene47 DUF7165
Other DBs
NCBI-GeneID: 108809453
NCBI-ProteinID: XP_018437095
UniProt: A0A6J0JN48
LinkDB
Position
4:15681795..15684138
AA seq 382 aa
MANTQTYGFPIYAADWIPEETVRSKIDKDKENSKDGSESSSSSSSRSCIVLAGGGGEGRS
GIPNVIVICRVDLESNSLSEQPVGRVVVTGGLPYRMAVHPSEGILICALPESCKRFDLEN
IMRPREGVELEEVVNELEDVGLQLALAFNQEGSVLAAGGEDGTSRIFEWPSMKTLLNESK
AHAEVKNLTFSESGKFLVSLGGPLCRVWDVNASTAVASLSKEKDEMFASCRFSVDNAGNE
VLYIAAKTERGGSIITWDTTSWKRRHSKLLKNYSISAFNVSPDGRFLAFGTLEGDVLIIS
STKMKTHQFVKKAHLGLVTALTFSPDSRCLVSVSIDSRAKLTVIEQKAETNGIDWPVVVL
MFVLLLVVSYYFLMVKGIIGEE
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggcgaatacgcagacttacggcttcccgatctacgccgcagactggatcccggaagaa
accgttagatcgaaaatcgacaaggataaggagaattccaaagatggcagcgagtcgtcg
tcgtcgtcgtcgtcccggagctgcatcgtgttggccggcggaggaggagaggggcgaagc
gggatccctaacgtcatagtaatctgtcgtgttgatctcgaatccaattctctctcggaa
caacctgtgggtagggttgtggtcactggtggtcttccttatagaatggctgttcatcct
tcggaagggattcttatctgtgcattgccagagagttgcaaacggtttgatttggaaaac
attatgaggccaagagagggtgttgagttagaggaagtggttaacgagttagaagatgtt
ggactacagttagctctggcgtttaatcaggagggctctgtgcttgctgctggtggggag
gatggaacttcgaggatttttgaatggcctagtatgaaaacgttacttaatgaatccaag
gcgcatgcagaagttaaaaacctaactttcagtgaaagtggtaagtttcttgtatcgctt
ggaggtccactttgtcgggtttgggacgtaaatgcttctactgccgttgctagtctctca
aaagagaaggacgagatgtttgcctcctgcagattctccgtcgacaatgcaggcaatgaa
gttctatacattgctgcaaaaaccgaacgtggtggaagtatcataacatgggatacaaca
tcatggaaaagaagacattcaaagcttttgaaaaactactctatatcggcctttaatgtc
tcacctgatggcagatttcttgcattcggaaccctcgaaggagatgttttgataattagt
tcaacaaaaatgaagactcatcaattcgttaagaaagctcatctcggtttggtcaccgca
ctgactttctcccctgattcaaggtgtttagtgtcagtatctattgactcaagggcaaag
ctaaccgtcattgaacagaaggctgaaacaaatggaatagactggccggtggtggttttg
atgtttgtgttgctattagtggtttcttattatttcttgatggtaaaggggatcataggt
gaagaatag

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