Raphanus sativus (radish): 108809562
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Entry
108809562 CDS
T06014
Name
(RefSeq) transcription factor IIIB 60 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108809562
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
108809562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
BRF2-like_C_cyclin_rpt
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
108809562
NCBI-ProteinID:
XP_018437201
UniProt:
A0A6J0JQ72
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All DBs
Position
6:10829225..10833343
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AA seq
566 aa
AA seq
DB search
MVWCNHCAKKVDGFRPEGGALACNKCGRILENFNFSDEVTFIKNAAGQSQASGNIVSSVQ
SGITSSRERRNRIARDELMNLRDALQMGDDSDVVVNMAFRLFGVAADRNFTKGRRSELVL
SSCLYLACRKRGLAFLLIDFSSYLRVSVYELGSVYLQLCELLFLVQNDNYEELVDPSIFI
ERFTKSLLKGAHDFQKTTEFMGTTKNIIASMKRDWMQTGRKPSGICGAAMYIAALSHGIT
CSTTDIAHIVHMCGATITKRLNEFANTEAATLTVEELKKSEKSILLEKTFTPRPNSAKEV
VNCKHKDSKSFGYGLCKDCHEKLMEVSGGVVGGSDPPAFQRAEKERMEKAAREENEGGGI
ERIEEEPYWNAEASDESDNLSDLDGDPVVDGCILDEDEKVAMKKSWEFLNRDWLKEQADK
EAALKTASEAFNASNANCPEYARNLVEASKASVTNSRKEKRQKRAEEAKNAPPASTPLEA
VTRALGRKNISFNYDLLEELLDTSSGEKSHKKSRTETVIEKKEKEVEIEEEEEEEDEEQP
YEMNTDEKFYEDQVEEEEDGYDFGLY
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggtctggtgtaaccactgtgcgaagaaagttgacggatttcgcccagaaggcggtgct
ttggcatgtaataaatgtgggaggatattggaaaacttcaatttttctgatgaagttaca
ttcattaagaatgccgctggacagagccaagcgtcaggtaacatagtgagtagtgttcag
agtgggattacaagctcacgtgaaaggagaaatagaatagctagagatgagttaatgaat
ttgagagatgccttgcaaatgggtgacgacagtgatgttgtggttaatatggctttccga
ttatttggggtggcagctgaccgaaacttcaccaaaggacgcagaagtgaactagtactc
tcttcctgtctctacttggcttgcaggaaaaggggtttagcctttcttcttattgatttt
tcgagctaccttcgagtttccgtttacgagttaggttctgtctacttgcaactctgtgaa
ctgctcttcttggtgcaaaacgacaactatgaggagcttgttgatccttctatcttcatt
gaacgattcacaaaaagcttattgaaaggtgcacatgactttcaaaaaacaacagagttc
atgggaacgactaaaaacattatagctagtatgaagagagattggatgcagactggccgg
aaaccaagtggaatatgtggagcagcaatgtacatagctgccctttctcatggtatcacg
tgctcgacgacagatattgcacacattgtgcatatgtgtggagcaacaataaccaaaaga
ttgaatgagtttgctaataccgaggctgcaactttaactgttgaggagctcaaaaaaagc
gaaaaaagtatattgcttgaaaaaacttttacgccaagaccaaattccgccaaggaagta
gtgaactgtaaacataaggattcaaaaagttttggttatggattatgcaaggactgtcac
gaaaagctcatggaagtttctggtggagttgttggtgggtcggatcctcctgctttccag
cgagcagagaaagagagaatggaaaaagcagctagagaagaaaacgagggaggaggcatt
gagagaattgaagaagaaccatattggaatgctgaagcttcggatgaatcagacaatctt
tctgacctcgatggtgaccctgtggtggatggctgtattcttgacgaggacgaaaaggta
gccatgaagaaatcatgggagtttcttaacagagactggcttaaggagcaagcagataag
gaagcagctctcaagactgctagtgaagctttcaacgcgagcaatgctaattgccctgaa
tacgcaagaaatcttgttgaagcttctaaagcatctgtgactaattctagaaaggaaaag
cggcaaaaacgtgcagaggaagcaaagaacgcgcctcccgcatccacacctttggaagct
gttaccagagcgcttggtagaaagaatatcagtttcaactacgatcttttggaagagctc
ttagatacttcctcaggtgagaagtcccacaagaaatcaagaaccgaaacagttatagag
aagaaggagaaggaagttgaaattgaagaggaggaggaagaagaagatgaagaacaacca
tacgaaatgaacacagatgagaaattctatgaagaccaagtggaagaggaagaggatggt
tatgattttggattgtattaa
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