KEGG   Raphanus sativus (radish): 108809581
Entry
108809581         CDS       T06014                                 
Name
(RefSeq) elongator complex protein 2
  KO
K11374  elongator complex protein 2
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rsz03016]
    108809581
Transfer RNA biogenesis [BR:rsz03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    108809581
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_BBS7 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 NBCH_WD40 WD40_Gbeta Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_WDR11_1st Nucleoporin_N
Other DBs
NCBI-GeneID: 108809581
NCBI-ProteinID: XP_018437230
UniProt: A0A6J0JNJ5
LinkDB
Position
1:complement(22411572..22415398)
AA seq 815 aa
MSEVSAKRVFIGAGCNRVVNNVSWGASGLLSFGAQNAVAIFCPKTAQILTTLPGHKASVN
CTHWLPSSKFAFKAKHLDRHYLLSGDTDGVIILWELSTNSNNWRHVLQLPQSHKKGVTCI
TAFMCSETDAMFASGSSDGVVNVWDVSFPSQPSEECKVSCLDSISADSKAIVTLSLAELP
QNPGRFTLAMGGLDNKIKLYCGERTGKFTSVCELKGHTDWIRSLDFSLPTEETTNSIMLV
SSSQDKVIRIWKLVLVGDVGSWQREITLASYIEGPVFVSGRFTYQVSVESVLIGHEDWVY
SVEWQPPVDGHQPLSILSASMDKTMMIWRPEKKTGVWVNVVCVGELSHCALGFYGGHWSP
DGVSILAHGYGGSFHLWRNVSSSKESENWQMQKVPSGHFAAVTDITWARTGEYLLSVSQD
QTTRVFSSWKSDEEDEHWHELARPQVHGHDINCVAMVQGKGNHRFVSGAEEKVVRVFEAP
LSFLKTLNHTCAGGEGSFPEDLQADVQVLGANMSALGLSQKPIYLHSSSVQVERNGGGEG
LETFETVPEAAPVELKEPPIEDQLAFHTLWPESHKLYGHGNELFSLCCDHSGSLVASSCK
AQSAAMAEIWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTD
NGEVSHKLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSIEKDARVKQVLALPQF
GSSVTAVAWTGLDQKEKTGCVAVGMESGLIELWNIKVKETEEGTTAALALKLEPFMCHVS
AVNRLAWRPSESNQSLLRLTSCGDDNCVRVFDFKV
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgtccgaagtctcagcgaagagagtgttcataggagcaggatgcaacagagtcgtcaat
aacgtctcttggggagcttctggtctcctttccttcggtgcccaaaacgccgttgctatt
ttctgccctaagacagcacagattcttacaacgctcccaggtcacaaagcttctgtcaat
tgcactcattggttacccagttccaagtttgctttcaaagccaagcatttggaccggcat
tatctgctctcaggtgatacagatggtgtcatcatcctctgggaactatcaactaacagc
aacaattggagacatgtactacaacttccacagtctcataagaaaggtgttacttgcatc
accgcgttcatgtgttctgaaaccgatgcaatgtttgcttccggttcttcagatggagtt
gtgaatgtctgggatgtttcttttccatcgcagcctagtgaggaatgcaaagtttcgtgc
ttggactctatctctgctgactccaaagcaattgtaacgctttcgttagcggaactgcct
caaaatcctggacgattcaccctggcgatgggtggattagacaacaaaatcaaactctac
tgtggagaaagaacggggaagttcacttctgtctgtgagcttaaaggccacactgactgg
atccggagtttggacttttcactaccaacagaagaaaccaccaatagtattatgcttgtg
agttcttcacaggacaaagtcattagaatctggaagcttgtgttagtcggtgatgttggc
tcatggcaaagagaaatcactcttgcttcttacatcgaaggtccggttttcgtctcaggg
aggttcacatatcaggtttcagtcgaatctgttctcattggacatgaagattgggtctat
tccgtggagtggcagcctccagtggacggccaccaacctttgagcattttatcggcttcg
atggacaaaacgatgatgatttggcgacctgagaagaaaactggtgtgtgggttaacgtt
gtgtgtgtaggagagcttagtcactgtgctcttggcttctacggtggtcactggagtcca
gatggtgtgtccatccttgctcatggatatggtggatcctttcatctgtggagaaatgtt
agtagcagcaaagagtctgagaactggcagatgcagaaagtcccttcaggtcattttgct
gctgtgactgacatcacgtgggctagaaccggcgagtacttgctgtccgtgagccaagat
cagaccacccgcgtgttctcgtcatggaagagtgatgaggaggatgagcattggcatgaa
ctggctcgccctcaggttcatggtcatgacattaattgtgtggctatggttcaaggtaaa
ggcaaccaccgttttgtaagtggagcagaggagaaagttgtgagggttttcgaggctcct
ctatctttcttgaagacactgaaccacacttgtgccggaggagaaggaagcttccctgag
gatctacaagcagatgtgcaggtccttggcgccaacatgtctgctcttggtttatcacag
aaacctatctacttacactcttctagtgtacaggtggagagaaatggcggaggagaaggt
ttggagacatttgaaacggttccagaggctgctccggtggagttgaaggagcctccaata
gaagatcagcttgcgtttcatactttatggcctgaatctcataaactctatggtcatggt
aatgaactcttttctctctgctgtgaccacagcggaagccttgttgcttcttcatgtaag
gctcaatctgcagccatggcggagatatggctatgggaggttgggacatggaaagctgtt
ggtcgtttgcaatctcacagtttaacagtgacacacttggagttctcttatgacgacact
ctgctcttgtctgtctccagagatcgccacttctcagtgttctctatccaaagaacagac
aatggcgaggttagtcacaaactcatggcaaaggttgaagcacacaagaggatcatctgg
gcatgttcatggaacccatttggccaccagttcgcaacttcatcaagagacaagacagtg
aagatctggtccattgagaaagacgctcgcgtcaaacaggttcttgccttgcctcagttt
gggagcagtgtcactgccgtggcttggacgggactagaccagaaggagaagaccgggtgc
gtagcggtcgggatggaaagtggactgattgagctgtggaacataaaggttaaagaaaca
gaggaagggacaacagcagctcttgctctgaagcttgaaccgttcatgtgtcatgtctcg
gccgtgaacaggttagcgtggagaccatccgagagtaaccagagcttgctgaggttaact
tcttgtggggatgataattgcgttagagtttttgacttcaaggtctga

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