Raphanus sativus (radish): 108809581
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Entry
108809581 CDS
T06014
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108809581
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
108809581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_BBS7
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
NBCH_WD40
WD40_Gbeta
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Beta-prop_WDR11_1st
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
108809581
NCBI-ProteinID:
XP_018437230
UniProt:
A0A6J0JNJ5
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Position
1:complement(22411572..22415398)
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AA seq
815 aa
AA seq
DB search
MSEVSAKRVFIGAGCNRVVNNVSWGASGLLSFGAQNAVAIFCPKTAQILTTLPGHKASVN
CTHWLPSSKFAFKAKHLDRHYLLSGDTDGVIILWELSTNSNNWRHVLQLPQSHKKGVTCI
TAFMCSETDAMFASGSSDGVVNVWDVSFPSQPSEECKVSCLDSISADSKAIVTLSLAELP
QNPGRFTLAMGGLDNKIKLYCGERTGKFTSVCELKGHTDWIRSLDFSLPTEETTNSIMLV
SSSQDKVIRIWKLVLVGDVGSWQREITLASYIEGPVFVSGRFTYQVSVESVLIGHEDWVY
SVEWQPPVDGHQPLSILSASMDKTMMIWRPEKKTGVWVNVVCVGELSHCALGFYGGHWSP
DGVSILAHGYGGSFHLWRNVSSSKESENWQMQKVPSGHFAAVTDITWARTGEYLLSVSQD
QTTRVFSSWKSDEEDEHWHELARPQVHGHDINCVAMVQGKGNHRFVSGAEEKVVRVFEAP
LSFLKTLNHTCAGGEGSFPEDLQADVQVLGANMSALGLSQKPIYLHSSSVQVERNGGGEG
LETFETVPEAAPVELKEPPIEDQLAFHTLWPESHKLYGHGNELFSLCCDHSGSLVASSCK
AQSAAMAEIWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTD
NGEVSHKLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSIEKDARVKQVLALPQF
GSSVTAVAWTGLDQKEKTGCVAVGMESGLIELWNIKVKETEEGTTAALALKLEPFMCHVS
AVNRLAWRPSESNQSLLRLTSCGDDNCVRVFDFKV
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagtctcagcgaagagagtgttcataggagcaggatgcaacagagtcgtcaat
aacgtctcttggggagcttctggtctcctttccttcggtgcccaaaacgccgttgctatt
ttctgccctaagacagcacagattcttacaacgctcccaggtcacaaagcttctgtcaat
tgcactcattggttacccagttccaagtttgctttcaaagccaagcatttggaccggcat
tatctgctctcaggtgatacagatggtgtcatcatcctctgggaactatcaactaacagc
aacaattggagacatgtactacaacttccacagtctcataagaaaggtgttacttgcatc
accgcgttcatgtgttctgaaaccgatgcaatgtttgcttccggttcttcagatggagtt
gtgaatgtctgggatgtttcttttccatcgcagcctagtgaggaatgcaaagtttcgtgc
ttggactctatctctgctgactccaaagcaattgtaacgctttcgttagcggaactgcct
caaaatcctggacgattcaccctggcgatgggtggattagacaacaaaatcaaactctac
tgtggagaaagaacggggaagttcacttctgtctgtgagcttaaaggccacactgactgg
atccggagtttggacttttcactaccaacagaagaaaccaccaatagtattatgcttgtg
agttcttcacaggacaaagtcattagaatctggaagcttgtgttagtcggtgatgttggc
tcatggcaaagagaaatcactcttgcttcttacatcgaaggtccggttttcgtctcaggg
aggttcacatatcaggtttcagtcgaatctgttctcattggacatgaagattgggtctat
tccgtggagtggcagcctccagtggacggccaccaacctttgagcattttatcggcttcg
atggacaaaacgatgatgatttggcgacctgagaagaaaactggtgtgtgggttaacgtt
gtgtgtgtaggagagcttagtcactgtgctcttggcttctacggtggtcactggagtcca
gatggtgtgtccatccttgctcatggatatggtggatcctttcatctgtggagaaatgtt
agtagcagcaaagagtctgagaactggcagatgcagaaagtcccttcaggtcattttgct
gctgtgactgacatcacgtgggctagaaccggcgagtacttgctgtccgtgagccaagat
cagaccacccgcgtgttctcgtcatggaagagtgatgaggaggatgagcattggcatgaa
ctggctcgccctcaggttcatggtcatgacattaattgtgtggctatggttcaaggtaaa
ggcaaccaccgttttgtaagtggagcagaggagaaagttgtgagggttttcgaggctcct
ctatctttcttgaagacactgaaccacacttgtgccggaggagaaggaagcttccctgag
gatctacaagcagatgtgcaggtccttggcgccaacatgtctgctcttggtttatcacag
aaacctatctacttacactcttctagtgtacaggtggagagaaatggcggaggagaaggt
ttggagacatttgaaacggttccagaggctgctccggtggagttgaaggagcctccaata
gaagatcagcttgcgtttcatactttatggcctgaatctcataaactctatggtcatggt
aatgaactcttttctctctgctgtgaccacagcggaagccttgttgcttcttcatgtaag
gctcaatctgcagccatggcggagatatggctatgggaggttgggacatggaaagctgtt
ggtcgtttgcaatctcacagtttaacagtgacacacttggagttctcttatgacgacact
ctgctcttgtctgtctccagagatcgccacttctcagtgttctctatccaaagaacagac
aatggcgaggttagtcacaaactcatggcaaaggttgaagcacacaagaggatcatctgg
gcatgttcatggaacccatttggccaccagttcgcaacttcatcaagagacaagacagtg
aagatctggtccattgagaaagacgctcgcgtcaaacaggttcttgccttgcctcagttt
gggagcagtgtcactgccgtggcttggacgggactagaccagaaggagaagaccgggtgc
gtagcggtcgggatggaaagtggactgattgagctgtggaacataaaggttaaagaaaca
gaggaagggacaacagcagctcttgctctgaagcttgaaccgttcatgtgtcatgtctcg
gccgtgaacaggttagcgtggagaccatccgagagtaaccagagcttgctgaggttaact
tcttgtggggatgataattgcgttagagtttttgacttcaaggtctga
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