Raphanus sativus (radish): 108809625
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Entry
108809625 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: RING-H2 finger protein ATL78
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108809625
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108809625
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
108809625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
FANCL_C
DUF648
DUF116
Motif
Other DBs
NCBI-GeneID:
108809625
NCBI-ProteinID:
XP_018437273
UniProt:
A0A9W3CSF6
A0A6J0JNV6
LinkDB
All DBs
Position
Unknown
AA seq
247 aa
AA seq
DB search
MVLKEPATKPRRSIYATLQTSFYHVDCNFFPTIKPTKLFQNILGNFYSRRLLLHTSSQPP
TIASXPLADAQEASHSYAHHMSFDTNVVKVLSVIFCALIFSLGLHSIIRVVMRYSNLLST
QASNELAVRLANTGVKGKALKSFQTLSYSTELKRSGLDTECAICLSEFVSGERVKLLPKC
HHGFHVRCIDKWLSSHSSCPTCRHCLIQTCQKIAGCGEASSSRNQPPHDIISVHIAPVGX
ERLIHSF
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggttctcaaagaacctgcaacgaaacctagaagatctatctatgcaactcttcaaact
agcttctatcatgtcgactgcaacttttttcccactatcaaaccaactaagctcttccaa
aatattcttggaaacttttactcaagaagactactacttcatacatcttctcaaccacct
accatagcatcgnccccattagcagacgctcaagaagcatcacattcttatgcccaccat
atgagctttgatacaaatgttgtcaaggtcctatcagttatcttctgtgcactaattttc
tcacttggactacattccatcataagagtggtgatgaggtactccaatttgttatcaacc
caagctagtaacgagctcgcagttcgcttggctaacacaggggtcaaaggaaaagcgttg
aaaagtttccagacattaagttactctacagagcttaagcggtctggcctagatacagag
tgtgccatatgtctctcggagtttgtatccggagagcgagtcaagcttctgccaaagtgc
caccatggcttccatgtccggtgtatagacaaatggctaagttcgcactcgtcgtgtccc
acatgcaggcactgcctcattcagacttgccagaagatagctggctgcggtgaggcgtcc
tcatcacgtaatcaaccaccacatgacatcattagcgtgcatatagcaccagtagganca
gaaagattgatacacagtttctaa
DBGET
integrated database retrieval system
