Raphanus sativus (radish): 108809734
Help
Entry
108809734 CDS
T06014
Name
(RefSeq) transcription factor IIIB 60 kDa subunit isoform X2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108809734
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
108809734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
BRF2-like_C_cyclin_rpt
DUF4554
Motif
Other DBs
NCBI-GeneID:
108809734
NCBI-ProteinID:
XP_018437390
UniProt:
A0A6J0JNZ5
LinkDB
All DBs
Position
6:53459142..53462683
Genome browser
AA seq
474 aa
AA seq
DB search
MAFRLFMMAADQNFTRGRRSELVLSSCLYLACRKKKIAVLLIDFSSYLRVSVYELGSVYL
QLCELFYMVDNPNREDLEELVDPSIFIERFTKGLLKGGAHGKKTKEDVMKTTENIISSMK
RDWMQTGRKPSGICGAAMYIAAISQGITCSTTDIAHIVHMCGATITKRLNEFANTEAASL
TVEELDKSKSIPFTPRPNSDKEVVNCKHKDSQSFGYGLCKDCHEKFMKVSGGVVGGSDPP
AFQRAEKERMAKAAREENEGGGIEKIEEEPYWNAEASDESDNLSDLDGDPVVDGCILDED
EKVAMKKSWEFLNRDWLKEQADKEAALKTASEAFNASNANCPEYARNLVEASKASVTNSR
KEKRKKRAEEAKNAPPASTPLEAVTRALDRKNISFNYELLEELLDTSSGEKSHKKSRTET
VIEKKKKEVEIEEEEEEEAEEDEEQPYEMNTDEKFYEDQVEEEKDEDGYDFGLY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggctttccgattatttatgatggcagctgaccaaaacttcaccagagggcgcagaagt
gaactagtactctcttcctgtctctacttggcttgcaggaaaaagaaaattgcggttctt
cttattgatttttcaagctaccttcgagtttccgtttacgagttaggttctgtctacttg
caactctgtgaactgttctatatggtggataacccgaaccgtgaggaccttgaggagctt
gttgatccttcaatcttcattgaacgattcacaaaaggcttattgaaaggtggtgcacat
ggcaagaaaacaaaagaagatgtcatgaaaacgaccgagaacattatctcaagtatgaag
agagattggatgcagactggccggaaaccaagtggaatatgtggagcagcaatgtacata
gctgccatttctcagggtatcacctgctcgacgacagatattgcacacattgtgcatatg
tgtggagcaacaataaccaaaagattgaatgagtttgctaataccgaagctgcaagttta
actgttgaggagctcgataaaagcaaaagtataccttttacgccaagaccaaattctgac
aaagaagtagtgaactgtaaacataaggattcacaaagttttggttatggattatgcaag
gactgtcacgaaaagttcatgaaagtttctggtggagttgttggtgggtcggatcctcct
gctttccagcgagcagagaaagagagaatggcaaaagcagctagagaagaaaacgaggga
ggaggcattgagaaaatcgaagaagaaccatactggaatgctgaagcttcggatgaatca
gacaatctttctgacctcgatggtgaccctgtggtggatggctgtattcttgacgaggac
gaaaaggtagccatgaagaaatcatgggagtttcttaacagagactggcttaaggagcaa
gcagataaggaagcagctctgaagactgctagtgaagctttcaacgcgagcaatgctaat
tgccctgaatacgcaagaaatcttgttgaagcttctaaagcatctgtgactaattctaga
aaggaaaagcgaaaaaaacgtgcagaggaagcaaagaacgcgcctcccgcatccacacct
ttggaagctgttaccagagcgcttgatagaaagaatatcagtttcaactacgaacttttg
gaagagctcttagatacttcctcaggtgagaagtctcacaagaaatcaagaaccgaaaca
gttatagagaagaagaagaaggaagttgaaattgaagaggaggaagaagaagaagctgaa
gaagatgaagaacaaccatacgaaatgaacacagatgagaaattctatgaagaccaagta
gaagaggaaaaggatgaggatggttatgattttggattgtattaa
DBGET
integrated database retrieval system
