Raphanus sativus (radish): 108809755
Help
Entry
108809755 CDS
T06014
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsz01002
]
108809755
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108809755
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108809755
Peptidases and inhibitors [BR:
rsz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108809755
Ubiquitin system [BR:
rsz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108809755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
zf-HIT
Motif
Other DBs
NCBI-GeneID:
108809755
NCBI-ProteinID:
XP_018437409
UniProt:
A0A6J0JRM2
LinkDB
All DBs
Position
1:complement(7651562..7656479)
Genome browser
AA seq
895 aa
AA seq
DB search
MLEPRGADIPILFLVLVVLPVVAYILLGKWSHISEKRGRANLLAQMAAEEAFRAETDVNE
NRRSLRFETVAAATESRAPRNRTKTTAPAWTGSVRSEFVAGVSGSVAELRPDDSVAAATC
GVPEGHVCARCLNPAKTRCSRCKSVRYCSGKCQIIHWRLSHKDECVPVETCSSERVSFEN
DSVLHDNGMDSSSTMYTKQTVKGKTSKSSVEFASAGISQIDITPRINTQGRKSLGKPNSS
KSNRESFGGESASAGGDSKKGHTRHKSRSNIGAVETNIGRHSVDNSRMQMNGHTFVSGMQ
ESYKNNSGVSCPNGTRIATLPKSGEQSCTETSKKGQVAVGVSKTVRSKDTCMAEESNGIS
ANMGSNLMKMMGLRNSTKHDKNLKMLFPYEEFVKFFQCEVFYLSPRGLVNCGNSCYANAV
LQSLTCTKPLVAYLLGRSHSRSCSGKDWCLMCELEQHVMMLRESGGPLSASRILSHMRSI
NCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQETTLVQHMFGGRLRSKVK
CLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARK
ELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDVPPLYMLYAVIVH
LDTLNASFSGHYISYVKDLRGNWFRIDDSEIHQVPMTQVMSEGAYMLFYMRSYPRPQRGE
HNVKPQARHSQQPRNDTKEQQRKPVNRFKPRADYYHKNLVEPSSSSSSEWSLFTSSDEAA
SFTTESTRDSFSTVDYTDGCHVLDSPFSIFNNLYHNNIVEPSPHNTVACRMFSGTKPETR
YFVEEEETNHNNNTVVMEDTSSSHGYYQQQQSMYVVDYETNHYQDHQTYGYEQNW
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaccaaggggagcggacataccaatacttttcctggttctggtcgtgcttcct
gttgtagcttacatactattaggtaaatggagtcatatttctgaaaaaagaggaagggct
aacctgctggctcagatggcagctgaagaagcttttagagctgagaccgatgttaatgag
aataggaggagtctgagattcgagactgtggcggcggccactgagagtagggctccgaga
aacaggaccaagacgactgctcctgcttggaccggttctgtaagatcagagtttgtggct
ggtgtgagtgggagtgtcgctgagctgagacctgatgattctgtagctgctgctacatgt
ggggtcccagagggacatgtatgtgcaaggtgtttaaaccctgctaagacacgctgctcg
agatgcaaatctgttagatactgctctgggaagtgtcagataattcactggaggttatct
cataaagatgaatgtgtcccggtggagacttgctcatcagagagggtctccttcgagaat
gattctgttttgcatgataacggcatggattcttcttctacaatgtatactaagcagacg
gtgaagggaaagacttcaaaaagctctgtggaatttgcaagcgctggtatctctcagatt
gatatcacaccacgaatcaacacgcaagggagaaaaagcttaggaaaaccaaactcttcc
aagtccaaccgagaatcatttggtggtgaatctgcttctgctggtggtgatagcaagaag
ggtcacactagacataagtcgagaagcaacattggtgctgttgaaacgaacattggaaga
cattctgttgataactctcgtatgcaaatgaatggacacacttttgtaagtggtatgcag
gaaagttacaaaaacaattcgggagtttcttgtccaaacgggactagaatagctacactt
cccaaatctggagaacaatcatgcacagagacaagtaagaagggacaagtcgctgttggg
gtatcaaagacggttaggtctaaggatacatgcatggctgaagaaagcaacggcatctcc
gcaaacatgggttcaaatttgatgaaaatgatgggtttaagaaattccacaaagcatgat
aagaacctgaaaatgctttttccatacgaggagtttgttaaattctttcaatgtgaagtg
ttttacttatcaccaagaggccttgtcaattgtggaaacagttgctatgcaaacgctgta
ctgcagtccttaacatgcacaaaaccactcgttgcttacttgcttggaagatcacattca
agatcatgttctgggaaagattggtgccttatgtgtgaacttgagcaacatgtgatgatg
cttagagaatctggaggtccactttctgctagcagaattctctcacacatgcggagtata
aactgtcagattggtgatgggagtcaagaagatgctcatgagttcttaaggcttttggtt
gcctctatgcaatccatatgtttagagagacttggaggtgagactaaagtggatccaagg
ctgcaagaaacaactttagttcaacatatgtttggtggacgtctccgctctaaggtgaaa
tgcttgaggtgtgatcatgaatcagaaagatatgagaatataatggacctaacactggag
atatacggatgggtagaatctcttcaagatgcattgactcagttcaccagaccagaagat
ctggatggagaaaacatgtatagatgcagcaggtgcgctggatatgtaagagctaggaaa
gaattgagcattcatgaagcaccaaacattctcacaattgttctcaagagattccaggaa
ggaagatacgggaaaataaacaaatgtataagttttcctgagatgctggacatgatacct
ttcatgacaagaaccggagatgttcctcctctttacatgctttacgctgttatagttcac
ttggatactctcaacgcatctttctctggtcattacatttcttatgtcaaagatttgaga
ggcaactggttcagaatcgatgattccgagattcatcaagtgccaatgactcaagttatg
tcagaaggagcttacatgttgttctacatgagatcgtacccgcgtcctcaaagaggagaa
cacaacgtaaaacctcaggctcggcattcgcagcaaccaagaaacgatacaaaggagcag
cagaggaaaccggttaaccgattcaaaccgagagcggactactaccacaagaacttagta
gagccatcatcatcatcatcaagcgaatggtctctcttcacgagctcagacgaagcagct
tcgttcaccacagaatcgaccagagactctttcagcacggttgactacacagacggctgc
cacgtcctagactctcctttctccatcttcaacaacttataccacaacaacatcgtggag
ccatccccgcacaacaccgtcgcctgcagaatgttctctggtaccaaacccgagacccgg
tatttcgtggaggaggaagaaacaaatcacaacaacaacacggtggtgatggaggacaca
tcatcatcccacggctattaccagcagcagcagagtatgtatgtagtagattatgagact
aaccactatcaggatcatcaaacttacggttatgaacaaaactggtag
DBGET
integrated database retrieval system
