Raphanus sativus (radish): 108809823
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Entry
108809823 CDS
T06014
Name
(RefSeq) paired amphipathic helix protein Sin3-like 5 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108809823
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
108809823
REST complex
108809823
Heterochromatin formation proteins
Other heterochromatin formation proteins
108809823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
Sin3_corepress
PAH
PAH_ZNF598
HHD_RTEL1
YIF1
Motif
Other DBs
NCBI-GeneID:
108809823
NCBI-ProteinID:
XP_056853239
UniProt:
A0A9W3CP93
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MKRVREEVYVEAQTRGQTNGRALTIGGGGGGNMGGLTTDDALSYLKAVKDMFQDKKDKYD
TFLALMKDFKAQRVNTSDVIASVKELFKGYDDLLLGFNTFLPKGYRITLPEKKPVAFGEA
IDFVNKIKARFGDDDRAYKRFLDILNMYRKEGKSISSVYQEVTLLFQGHEDLLAEFVNFL
PNNSGSGSGSYAVPHDRSASLHAMHFNKKIKIGSRPDEYTAHSDQREDGDENLVAAGNSR
GKSLNQGQWPGYRQVEDNEIGHENVVFGQKNNMVKGINELDLTDCVQCTPSYRHLPDDYP
IPISSYRNSLGKKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRYELDMLLESV
NAAIKRVETLLEKMNNNTISTPICIKEHLSVLNLRCIERLYGDYGLDVMEILNKNSHIAL
PVILTRLKQKQEEWARCRFDFRKVWADVYAKNHHKSLDHRSFYFKQQDSKNLSTKGLVAE
IKDISDRKHKEDPLHAIAVGTKPSFIPDLEFSYSDTQVHADLYQLIKYYCEEICATEQSD
KVMKLWVAFLEPMFGVPSRSQTSEAMIDVAKSKDNQEQHDAREAVKDSTCDVSLVSNLKL
LTPPTTPNKEIPTVQGSSVAQETIQQDKLHVGAAMNIEDTQPPKLVSPPRKDLLMEGVEN
RSDVMMGDQKVEREEGELSPTESFEQDNHEVYRDNDGESVQKLPDNVGGSKEQEHKGGSV
FTETKAKSNTLPKDDENKTTHASGSKFGGQVSSDEEHKGAMNCDRLDSVIESENEAVGMI
KSNESEGGSLTLSERYLRPVKPLAKHVSEALQVSESNSPNDSRVFYGNDSFYVLFRLHQM
LYERIQSAKIHSERKWKAPDPDKTSPDSYARFMDALYNLLDGSSDNTKFEDECRAIIGAQ
SYVLFTLDKLVQKFVKHLHSVAADDTDTKLLQLYTYEKYRKPGRFFDIVYHENARALLHE
QNIYRIEYSSAQTRLAIQLMNNGNDHQPEVTAVTVEPGFANYLQNDFLSLLPDEERPGLF
LKRNKVKMNGPDESSGMLRAMEGLKIINEVECKMACSSSKVKYEPNTSDLLYRSKQRKPK
VNPNGLVDNDKTPGSSETSRKKRISRFHLCLNRRLAALP
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagttagagaagaggtttatgttgaagctcagacacgaggacaaacaaatggt
agggctttaacgataggtggaggaggaggaggaaacatgggagggctaacaacggatgat
gccctgagctatctcaaagctgtcaaggatatgtttcaagacaagaaagacaagtacgac
actttccttgcactcatgaaggattttaaagcccagagagttaacacgagtgacgtcatt
gcaagcgtaaaagagttgttcaagggctatgacgacttgcttttggggtttaataccttc
ttgcctaagggttacagaataacccttcctgagaagaagcctgtggcttttggagaagct
atcgattttgttaacaagatcaaggcgcggtttggggatgatgaccgtgcgtataaaagg
tttcttgacatcttgaacatgtatagaaaggaaggcaagtccatctcctctgtctatcaa
gaggttactctgttgttccagggccatgaagatctgcttgctgagtttgttaatttctta
cctaataattcaggatcaggttcgggaagctatgcagtaccgcatgacagaagtgcttca
cttcatgccatgcattttaacaagaaaataaaaattggaagtaggcctgatgagtatacc
gctcactctgatcaacgggaagatggtgatgagaatcttgtggctgctggtaattctcgg
ggaaaatcccttaatcaaggtcaatggccgggttaccggcaggtagaagacaacgagatt
ggtcatgaaaatgtagtctttggccaaaaaaataatatggtcaagggtataaatgaactg
gatcttactgactgtgtacaatgtacaccaagctatcgtcacctgccagatgattatccc
attcctatttcaagctaccgaaattcactaggcaaaaaggtactcaatgatcattgggtc
tctgtcacatcggggagtgaggactactcattcaaacacatgcgtaaaaaccagtatgaa
gaaagcttgtttcggtgtgaagatgacaggtatgagttggatatgttattagagtctgtg
aatgcagccattaagcgtgtggaaacgcttctggagaagatgaacaacaacacaatctct
acaccaatttgtatcaaagaacacttatcagtgctgaacctaagatgcattgagcggttg
tacggggattatgggcttgacgttatggaaattctgaacaagaactctcatatagccttg
ccggtgatactaactcgcttgaagcagaaacaagaagaatgggctaggtgtcgctttgat
ttcaggaaagtatgggctgatgtatatgcaaagaatcatcacaaatcactagatcaccgt
agcttttattttaagcagcaggactccaagaatctgagcacaaaaggtttggtggctgag
ataaaagatatcagtgacagaaagcataaagaagacccgcttcatgccattgctgtcgga
actaagccctctttcatcccagacttggaattcagttattccgatactcaagttcatgct
gacttataccaactaatcaagtattactgcgaagaaatatgtgccactgaacagtcagat
aaagtaatgaagctgtgggtagcctttttggagcccatgtttggcgttccttctaggtct
caaactagtgaggcaatgatagatgttgcaaagtccaaagacaaccaagagcagcatgat
gcacgtgaggcagtgaaggacagcacctgtgacgtttctcttgtctcaaacctaaaactt
ctaacacctccaacaacacctaacaaagaaatcccaacagtacaaggaagctctgtcgca
caagaaaccattcagcaagataaactgcatgttggcgcagctatgaatattgaggatacc
cagcctcccaagctggtgtcaccacccagaaaggatttattaatggagggtgtagagaat
cgtagtgatgtaatgatgggagatcagaaggttgagcgagaagagggtgagttatctccc
accgaaagctttgagcaagacaatcatgaggtttatagagacaacgacggggagtctgtt
cagaaactgccagacaatgtaggaggtagtaaagagcaagagcacaaaggaggttcagtc
tttactgaaaccaaagcaaagagcaatactctccctaaagatgatgaaaataaaactact
cacgcctcaggaagcaaatttggtggccaagtttcttccgatgaagagcataaaggagct
atgaactgtgaccggctcgacagtgtgattgagagtgaaaatgaggctgtagggatgatt
aaatccaatgagagtgaaggtggatctctcacactttcagaacggtatctgcgacctgta
aagccccttgcaaagcatgtgtctgaagcactgcaagtcagtgaaagtaactctcctaat
gattctcgagttttctatggaaatgattccttttatgtgctttttaggcttcatcaaatg
ttgtacgagagaatacaatctgcaaagatacattcagagaggaaatggaaagctccagat
ccagataaaacatctcctgattcttatgctaggttcatggatgctctctataatttactt
gacggctcaagtgataatacaaagttcgaagatgaatgccgagctattattggagcacaa
tcatatgttctcttcacattggacaagctagttcagaagtttgtcaagcatcttcattca
gttgcagctgatgatacagacaccaagctactgcaactatacacatatgagaaatacaga
aaacctggaagattctttgatatagtgtaccatgagaatgcgcgagcccttctccatgag
cagaacatataccggattgaatattcatcagcacagacccgtctggcgattcaacttatg
aacaacgggaacgatcatcagcctgaagttacagctgtaacagtggaaccaggttttgca
aattatcttcagaatgactttctttcgcttttacctgatgaagaaagacctggtctattt
ctcaagaggaacaaggtgaaaatgaacggtccagatgagtcttcagggatgttgcgtgca
atggaaggattgaagattatcaatgaggtcgaatgtaagatggcttgcagttcttccaag
gtcaaatatgaaccaaacacatcagatcttctgtatagaagcaagcagaggaaaccaaaa
gtgaatccaaatgggcttgttgacaatgacaaaactcctggtagcagtgaaacctcgaga
aagaaaagaatatcgcgatttcacttgtgtctgaaccgtagacttgctgccttgccttaa
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integrated database retrieval system
