KEGG   Raphanus sativus (radish): 108810279
Entry
108810279         CDS       T06014                                 
Name
(RefSeq) RING-H2 finger protein ATL40
  KO
K19038  E3 ubiquitin-protein ligase ATL41 [EC:2.3.2.27]
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsz04121]
    108810279
Enzymes [BR:rsz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108810279
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    108810279
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-RING_UBOX zf-RING_16 zf-C3HC4_3 Prok-RING_4 Orf78 DUF6768 zf-RING-like SLX1_C PHD_NSD zf-RING_10 VP1_VP3 RINGv
Other DBs
NCBI-GeneID: 108810279
NCBI-ProteinID: XP_018437903
UniProt: A0A6J0JQT2
LinkDB
Position
6:51508438..51509389
AA seq 217 aa
MSSDNGNSDQEIDPDRLFWQNTASYNGSSKILLITIVAFSIIILIVFAYHIYERFVLRRR
RSTFQDHTFSVVSEPPKRGLDKVVIASLPTFVVGVNGDNVSATECAVCLTLLEEKAFHVR
MLPNCKHVFHVTCVDTWLTTRSTCPICRNEVEPSQRLEPEPREGPVGDGASSSDNKSGGS
LAVRLDSFRRILTRERSSDRNDHSRVDQDRVLDLERQ
NT seq 654 nt   +upstreamnt  +downstreamnt
atgagctctgacaacggaaatagtgatcaggagatcgaccccgaccgtttgttctggcaa
aacacggcttcatacaatggcagcagcaagattttactcatcaccatcgttgctttctct
attatcatcctcatcgtctttgcttatcatatatacgaaagattcgttctccgccgccgt
agatccaccttccaagaccacactttctccgtcgtctctgaaccgcccaaacgtggcctc
gacaaagttgtcattgcttctctgcctacgttcgtggttggagtcaacggtgataacgta
tcggctacggaatgtgcggtgtgtctaaccttgttggaggagaaagctttccacgtgagg
atgttaccgaactgcaagcacgtgttccacgtgacatgcgtggacacatggctaacaacg
cgctccacttgcccaatttgtagaaatgaagtcgagccgagtcaaagacttgagcctgag
ccaagagaagggcctgttggcgacggtgcatcttcgtcggataacaaaagtggcgggtca
ttggctgtgcggttagattcttttcggaggattttgacacgggaaagatcttcggacagg
aacgatcattctcgcgttgaccaagatcgtgtattagatcttgaaagacaatga

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