Raphanus sativus (radish): 108810412
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Entry
108810412 CDS
T06014
Name
(RefSeq) putative SNAP25 homologous protein SNAP30
KO
K18211
synaptosomal-associated protein 25
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108810412
Membrane trafficking [BR:
rsz04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-25
108810412
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
DUF5089
TolA_bind_tri
Ipi1_N
DUF413
Use1
Motif
Other DBs
NCBI-GeneID:
108810412
NCBI-ProteinID:
XP_018438029
UniProt:
A0A6J0JTE8
LinkDB
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Position
6:37113020..37114652
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AA seq
266 aa
AA seq
DB search
MFGLFKSPGNNKVPNESSNNKGGGTINAGRRTTSEPILITPDFDEDDDKYKKGFSNSGDL
QSQTTEDLEKYAVYKAEETTKGVNNCLRIAEDIRSDATKTLDMLHAQGEQINRTHVMAVD
MDKDLGRGEKLLNSLGGMFSKPWKPKKGKEITGPMITPDKPSKKSGNNKEEREKLGLAAK
GRSSSQPIPSDQPTSALQKVEQEKAKQDDGLSDLSDILGDLKGMALDMGSELDKQNKALD
HLDGDIDELNNRVQGANQRARHLLSK
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacttttcaaatctccagggaacaacaaagttcccaatgaatcatcaaacaac
aaaggaggaggaaccatcaacgcaggaagaagaacaacttctgaaccaatcctaatcaca
ccagatttcgacgaggatgacgacaagtacaagaagggtttcagcaactctggtgatctg
cagagccaaactacggaggacttagagaagtacgcggtttataaagccgaagaaacaacc
aaaggtgtcaacaactgtcttaggatcgctgaagatataagatcggatgctacaaaaacg
cttgatatgttgcacgcgcaaggtgaacagattaacaggactcatgttatggctgttgac
atggataaagatctcggtcggggagagaagcttttgaacagcttaggaggaatgttttct
aagccatggaaacctaagaagggtaaagaaatcacaggacctatgatcacaccagataaa
ccgtcgaagaagagcgggaataacaaggaagaacgagagaaactcggtttggctgcgaaa
ggacgatccagtagccaaccgataccgtcagaccaaccaacaagtgctttgcagaaagtg
gagcaagagaaggcaaagcaagacgacggactttcagatttgagtgacattttgggtgat
cttaagggcatggcccttgacatgggatctgaactcgacaagcaaaacaaggctcttgat
catctcgacggagatattgatgagctgaacaatcgtgttcaaggagctaatcaacgggca
cgtcacttgctttccaaataa
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