Raphanus sativus (radish): 108810577
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Entry
108810577 CDS
T06014
Name
(RefSeq) polygalacturonase ADPG2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00040
Pentose and glucuronate interconversions
rsz01100
Metabolic pathways
Module
rsz_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108810577
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
108810577
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
108810577
NCBI-ProteinID:
XP_018438181
UniProt:
A0A6J0JSZ3
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Position
6:complement(51383911..51386338)
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AA seq
435 aa
AA seq
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MACCCKFLTGFLLWALLMLSWCEASRSSINGYDHHHSYGMFKSYSLIKRRDGITRLKSFA
RVSSRPPTTVSVSDFGAKGDGITDDTQAFVNAWNKACSSSGAVNLLLPEGKTYFLKSIRL
NGPCKSILTIQIFGTLSASQKRSDYKDISKWITFDSINSLSVDGGATGTVNGNGETWWQN
SCKRNEAKPCTDAPTALTFYNSENLQVNNLRVRNAQQIQISIEKCSNVQVSNVEVTAPAD
SPNTDGIHITNSQDIQISKSIIGTGDDCISIETGSQNVKINDLTCGPGHGISIGSLGDDN
SKAFVSGVTVDGAKLSGTENGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIIIDQDYCDK
SKCTEQTSAVQVKNVVYRNISGTSASDIAITLNCSKNYPCQEIVLDKVNIKGGKGSCSNA
NVMDEGTVFPQCKST
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttgttgcaaatttttaaccggcttcctattatgggctcttttgatgctttca
tggtgcgaagcttcaagaagcagcattaatggatatgatcatcatcattcttatggaatg
ttcaaatcctatagcttaatcaagcgaagagatggtatcacacgtttgaaaagctttgca
agagtctcttcccggcctccaaccaccgttagtgtttctgattttggagctaaaggagat
ggaataaccgatgacacgcaggcgtttgtaaatgcatggaataaagcatgttcttcaagt
ggagccgttaatctcttacttcctgaagggaagacttacttcctcaagtctattcgatta
aatggtccatgcaaatcaatccttaccattcagatattcggaacgttatcggcatctcaa
aagcgatcggattacaaagatatcagcaaatggattacgtttgatagcattaacagtcta
tctgtagacggtggcgccaccggaactgtcaatggaaatggcgaaacgtggtggcaaaac
tcatgcaaacggaacgaagctaagccatgcacagacgcaccaacggctcttactttctac
aactcagagaatttgcaagtgaataatctgagggtgagaaatgcgcaacagattcagatt
tcaattgagaaatgctctaacgttcaggtctcaaatgttgaggtcactgcacctgctgat
agtcctaacaccgatggtattcacatcactaacagtcaagacatccaaatctccaaatcc
atcattggaacaggtgatgattgtatatctattgaaactggatcacaaaatgttaaaatc
aatgatttaacttgcggccctggtcatggtatcagcatcgggagcttaggagatgacaac
tcaaaggcatttgtatcaggtgtgactgtagatggtgctaagctttccggaacagaaaat
ggagttaggatcaaaacatatcagggagggtcaggaactgctagcaatatcatatttcag
aacattcagatggacaatgtaaaaaatccaatcataatcgaccaagattattgcgacaag
agtaaatgcaccgaacagacatccgcagtccaagtgaaaaacgtggtgtaccggaacata
agtggcacaagcgcatcggacatagcaataacgttgaactgtagcaagaactatccatgc
caagagattgtgcttgacaaagtaaacattaaaggaggaaaaggaagctgcagcaatgct
aatgtgatggatgaaggcactgttttccctcagtgcaaatccacttaa
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