Raphanus sativus (radish): 108810580
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Entry
108810580 CDS
T06014
Name
(RefSeq) RING-H2 finger protein ATL39
KO
K19038
E3 ubiquitin-protein ligase ATL41 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108810580
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108810580
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
108810580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-Nse
zf-RING_5
Zn_ribbon_IFT122_C
zf-RING_16
zf-C3HC4_4
T3SS_NleG
zf-RING_10
Prok-RING_4
zf-RING_Vps41
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
108810580
NCBI-ProteinID:
XP_018438183
UniProt:
A0A6J0JRJ6
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All DBs
Position
6:48291190..48292042
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AA seq
153 aa
AA seq
DB search
MGFHDPSLNSIILCFAAVTSLLTFSVIFIFLFMCVLKSRGFVDVLPETEDDHHHRRREPP
GQGLSASVIAAFPTFSYKPDNNDPESTNQEIECPVCLGLIPKNVVIKVLPNCMHMFDEEC
IGRWLETHTTCPVCRRMAEPMSSTGDKVLESIV
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgggtttccacgacccttcgttaaactcaatcatcctttgcttcgccgccgtaacgtct
ctcttgactttctccgttatcttcatctttctatttatgtgtgtgctcaaaagccgtggg
tttgtggatgtattaccggaaacagaagacgaccaccaccaccgcagaagagaaccaccg
ggccaagggcttagcgcttccgtgattgccgcctttccgaccttttcttacaaacctgac
aataatgatccggagagcaccaatcaagagatagaatgtccggtttgcttaggattaatc
cccaagaatgttgtgattaaggttttaccaaattgtatgcacatgtttgatgaggaatgt
ataggtaggtggcttgaaacgcatacaacttgtcctgtgtgtcgtagaatggctgagccc
atgtctagcactggggacaaggtcttagaaagcatagtatag
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