KEGG   Raphanus sativus (radish): 108810580
Entry
108810580         CDS       T06014                                 
Name
(RefSeq) RING-H2 finger protein ATL39
  KO
K19038  E3 ubiquitin-protein ligase ATL41 [EC:2.3.2.27]
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsz04121]
    108810580
Enzymes [BR:rsz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108810580
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    108810580
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-rbx1 zf-RING_11 zf-C3HC4 zf-ANAPC11 zf-RING_UBOX zf-C3HC4_3 zf-Nse zf-RING_5 Zn_ribbon_IFT122_C zf-RING_16 zf-C3HC4_4 T3SS_NleG zf-RING_10 Prok-RING_4 zf-RING_Vps41 zinc_ribbon_16
Other DBs
NCBI-GeneID: 108810580
NCBI-ProteinID: XP_018438183
UniProt: A0A6J0JRJ6
LinkDB
Position
6:48291190..48292042
AA seq 153 aa
MGFHDPSLNSIILCFAAVTSLLTFSVIFIFLFMCVLKSRGFVDVLPETEDDHHHRRREPP
GQGLSASVIAAFPTFSYKPDNNDPESTNQEIECPVCLGLIPKNVVIKVLPNCMHMFDEEC
IGRWLETHTTCPVCRRMAEPMSSTGDKVLESIV
NT seq 462 nt   +upstreamnt  +downstreamnt
atgggtttccacgacccttcgttaaactcaatcatcctttgcttcgccgccgtaacgtct
ctcttgactttctccgttatcttcatctttctatttatgtgtgtgctcaaaagccgtggg
tttgtggatgtattaccggaaacagaagacgaccaccaccaccgcagaagagaaccaccg
ggccaagggcttagcgcttccgtgattgccgcctttccgaccttttcttacaaacctgac
aataatgatccggagagcaccaatcaagagatagaatgtccggtttgcttaggattaatc
cccaagaatgttgtgattaaggttttaccaaattgtatgcacatgtttgatgaggaatgt
ataggtaggtggcttgaaacgcatacaacttgtcctgtgtgtcgtagaatggctgagccc
atgtctagcactggggacaaggtcttagaaagcatagtatag

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