Raphanus sativus (radish): 108811327
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Entry
108811327 CDS
T06014
Name
(RefSeq) RINT1-like protein MAG2L
KO
K20474
RAD50-interacting protein 1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108811327
Membrane trafficking [BR:
rsz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
108811327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
DUF4972
Motif
Other DBs
NCBI-GeneID:
108811327
NCBI-ProteinID:
XP_018438878
UniProt:
A0A6J0JTJ2
LinkDB
All DBs
Position
1:3282676..3285459
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AA seq
800 aa
AA seq
DB search
MEHPRPPLSFVLPKPAELSGLASSFLDGNFEDLRDLLSRASNLTSHLKHDTTHLNDRLLH
LRTDLTKHAVSWISTSLSAKNSLDDLRLSLESLSLVTSLPRSKDAVRKQREQELQQLVEE
LCRIQNRRRYLVTALKLESLVGDLEDSVFHPMTRRSMLQDRVYKQERFNHAIKTMNEIEQ
VLGDVTTQWRRLVGTVDSRVDKSLSILRPQIIAEHRAFLSSLGWPPKLALLSKDEGGGDA
AASCSSIPNPLVLMQGDQKEYYSQSFLLLCGLQQLNTLKEKRKKLHKESSSGVGLWAIDE
LVIPVASRMEYHFTKWAEEPEFIFALVYKVTSDFADGVDDLLQPLIDRAMLVSCSAKEAW
VSAMVQMLSCFLEKKVFPGLIEMLKEEKKKRMKPEGVSSWFHLVDQMVTFDKRMQSFVNS
DTCLSYEGSSSVAAFSQGMSVMGVFCKRPEWLKTWGKIEVKDAYRKLKEDIKKEKAWLVV
NSEGTRLGNESNSYVLSTREDYKAPFVAESFITRTWTLIDHGLSLPTILPRIQFVRATAT
KFLWYIFKTLLLEFKKTDLSDYSSFEDSLIQACGPINTARYLESKLREWSDDLVFVEMWD
AETNVKVGRDNGGSCHGCFFGEELKSLVDLETNWLMEIITVCLNQFDNLCGDHFHSNADT
WEEEVITVSRGVAEALDSLRRELSVLQLNMNRKDFLDLWRNLAEGLDHYVSCKFFVGEAV
LLRRRFEVDAEALMMVFQPYCVRPGAFFPRVREILRLLSMNEEDKARLRGAISRNGSNCL
SSFGISNLSPQLVEQFCRCY
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggaacatcctcgtcctccactgtcgttcgtcttgccaaaaccggccgaactttccggt
ttagcgtcgagctttctcgacggtaacttcgaggacctgcgagatctcctctcacgcgct
tcgaatctaacctctcatctaaaacacgacactactcatctaaacgaccgccttctccac
ctccgtacggatctgaccaaacacgccgtctcctggatctccacctctctctccgctaaa
aactcactcgacgatctcagattgagcctcgaaagtctcagccttgttacatctctccct
cggagtaaggatgctgtcaggaagcaaagggaacaggagttacagcaactcgttgaggag
ctgtgtcgaattcagaacaggcgcagatatctcgtgactgccttaaagctggagagttta
gttggagatcttgaagattcagtgtttcatcctatgacaagaagaagtatgcttcaagat
cgtgtgtacaagcaagaaaggtttaaccacgcgattaagaccatgaatgagattgaacaa
gtgcttggtgatgttacaacacagtggcgccgccttgtaggtactgttgacagcagagta
gataaaagcttgtccattctacggccacagatcatcgcagagcaccgagcctttctctca
tctcttggctggccaccaaagctggcgttgttatccaaagatgagggtggaggagacgct
gctgctagttgtagtagtatccctaatcctctagtactgatgcaaggagaccaaaaggaa
tattattcccaaagcttccttctcctctgtggtttacagcagcttaacaccctcaaggag
aaacggaagaagcttcataaagaaagtagtagtggtgttggactttgggcaatcgatgag
cttgtaatacccgttgcgtctcggatggagtatcacttcacgaaatgggctgaagagcct
gagtttatctttgcgcttgtctacaaagtcacaagcgactttgctgatggggtggacgat
ctcttgcagcctttgatcgacagagctatgttagttagctgtagtgctaaagaggcttgg
gtttcagctatggtccagatgctgtcctgtttcttagagaagaaagtgtttcctgggctt
atagagatgctcaaggaggagaagaagaagcgcatgaaacctgaaggtgtttcctcgtgg
ttccaccttgtagatcagatggttacttttgataaacggatgcagtcatttgtgaactca
gacacttgtctttcttacgaaggctcctcctcggtagcggcgttttcgcaaggtatgtcg
gtaatgggggtgttttgtaagagacctgagtggctcaagacctggggcaagattgaggtg
aaggatgcttatagaaaacttaaagaggatatcaagaaggagaaagcttggctggttgtt
aatagtgagggaactagacttggtaatgaatcaaactcgtatgttctgtctacaagagaa
gattataaagctccgtttgtagcagagagttttattactaggacttggacgttgatagac
catggtctatctctaccaaccattctcccgaggatccaatttgtaagagctactgccacc
aagtttctctggtatatattcaaaactctgttactggagttcaagaagactgatctctct
gactatagctcgtttgaagattcgctgatacaagcctgtggacctattaatactgctagg
tatctcgaatcgaaactacgagagtggagtgatgatttggtgtttgtggagatgtgggat
gctgagaccaatgtcaaagttggtagagataatggaggttcctgtcatggttgctttttt
ggggaagaactgaaaagtcttgttgacttggaaacaaactggcttatggagattataact
gtttgtctcaaccaattcgacaatctttgcggcgaccacttccacagcaatgcagataca
tgggaggaggaggtcattacagtgtcccgaggtgttgcagaagctttggacagtttaaga
cgagaactctctgttctccagttaaacatgaaccgaaaagacttcttggacttgtggagg
aatcttgctgaagggcttgaccattatgtttcttgtaaatttttcgtaggagaagctgtt
ttactgaggaggaggtttgaggttgacgcagaggcacttatgatggtgtttcagccttac
tgtgttcgccctggtgcattcttccctcgagtgagagagattcttaggctgttgagtatg
aatgaggaagacaaggcacgacttagaggagctataagtcgtaatggaagtaactgttta
agttcgtttggtatttctaacttgtctcctcaacttgtagaacagttttgtaggtgttac
tag
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