Raphanus sativus (radish): 108811454
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Entry
108811454 CDS
T06014
Name
(RefSeq) transcription factor MYB30
KO
K23865
transcription factor MYB30
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108811454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108811454
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
108811454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
N-SET
HTH_Hrp3
Myb_DNA-bind_7
FancD2
Motif
Other DBs
NCBI-GeneID:
108811454
NCBI-ProteinID:
XP_018439003
UniProt:
A0A6J0JTW6
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All DBs
Position
6:complement(16569052..16571357)
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AA seq
332 aa
AA seq
DB search
MVRPPCCDKGGVKKGPWTPEEDIVLVTYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY
LRPGIKRGNFTENEEKMIVHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLNKAN
QDSNQEVDQSRDHSSLSSSPSSSSANSNSNIARGQWERRLQTDINLAKKALSEALSPAVS
PIITLAATTATTSSSAESRRSISSARGVLRAQETSTTYASSTENIAKLLKGWVKNSPKTR
NCADRMVSPDSVTKEVIKSDVEKDYAGPFQSFSGFDQLKDCDLAGVSPDHETKPDITGCS
NQSQWSLFENWLFEDSGGQIGDILLDESPNFF
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggtgagacccccttgttgtgacaaaggaggagtgaagaaagggccatggactcctgaa
gaagatatcgttttagttacttacatccaagaacatggtcctggcaattggagagctgtt
cccaccaatactgggttgcttagatgcagcaagagttgtaggcttagatggacaaactat
ttaaggccaggaatcaaaagaggcaacttcacagaaaatgaagaaaagatgattgtccat
ctccaagcactcttaggcaatagatgggctgcaattgcctcttatcttccacaaaggaca
gacaatgacattaagaactattggaacactcacttgaagaagaaactcaacaaggccaat
caagattctaatcaagaagttgatcaatcaagagaccattcctcactctcttcttctcca
tcgtcttcctctgctaattccaactcaaacatcgcaagaggccaatgggaaagaaggctt
caaaccgatattaacttggcgaaaaaggctctctctgaggctttgtctcctgccgtatca
ccgatcattacattggcggccactacggcaacaacatcttcttctgctgaatcaagacgt
tctatttcctcagctaggggggttcttcgggcgcaagaaacatctaccacttatgcctca
agcactgagaatatagcaaaactgctcaaagggtgggtgaagaactctccaaagactcga
aactgtgcggatcgaatggtttctccagattctgtgacaaaagaagtgatcaaaagtgat
gtcgagaaggactatgcaggaccatttcaatcattttcagggttcgatcaattgaaagat
tgtgacttggctggagtttcacctgatcatgagaccaaaccagacataactggatgcagt
aaccaaagtcaatggtctttgttcgagaactggctatttgaggattctggtggacagatt
ggtgacatattattggatgaaagccctaatttcttctga
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