Raphanus sativus (radish): 108811615
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Entry
108811615 CDS
T06014
Name
(RefSeq) piezo-type mechanosensitive ion channel homolog isoform X1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108811615
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rsz04040
]
108811615
Membrane trafficking [BR:
rsz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108811615
Ion channels [BR:
rsz04040
]
Other channels
Mechanosensitive channel (Piezo)
108811615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
DUF2570
DUF6779
Motif
Other DBs
NCBI-GeneID:
108811615
NCBI-ProteinID:
XP_018439182
UniProt:
A0A6J0JWW9
LinkDB
All DBs
Position
6:complement(53654849..53666209)
Genome browser
AA seq
2488 aa
AA seq
DB search
MASFLLGFLLPSLLLAAALINWSLISFVDLIAFLLLHYIAPEIGYRFQRSHCLLWPLFFF
SCVIIVSQVVYLFIWDSLGPDWDTSDTGWITLTGFMILKSWRNPTVMYFLALQLLASLVS
LAYIYTSRFGFLPWPYTCWSHFSHVFEHLGSHLRVASCLFLPAVQLAVGICNPSWMSLPF
FIGSCAGLVDWSLTSNVSGLFRWWRVLYIYSGFNIVLLYLYQLPINFSDMIRWIASFIGL
FRISAETEGPDICSGLFLLLFFIMLSYVRSDLEDMDFFMSTSENNLAERLLPPKYSFFIR
ESRAGVRHTNVLLRGSVFKTFSINFFTYGFPVSLFALSFWSFHFASLCAFGLLAYVCYII
YAFPSLFRLHRLNGLLLVFILFWAVSTYIFNVAFSFLNTKVGKDMKIWEMVGLWHYTIPG
FFLLAQFGLGMLVALGNLVNNSVFLYLSEESSRSSNDRSYAEADEETKVLVVATIAWGLR
KCSRAIMLALIFLIAMKPGFVHAVYVVFFLIYLLSHNINRKIRKSLILLCEVHFALLYIL
EIDLVSNSLKRQGSVSREILFQLGLLRSESSWDFLEIALLACFCAIHNHGFEVLFSFSAI
VRHTPSPPIGFSILKAGLNKSVLLSVYSSPSSSYSQDNTTYERHIASFLSAIGQKFLSMY
RSCGTYIAFITILISVYLVKPNYVSFGYIFLLLLWITGRQLFEETKRRLWFPLKVYAFSV
FMFIYCLSSFVSLQLWLSGYIDLYFFLGYNSKAPLLDNVWESLAVLVVMQLYSYERRQSG
HYIPGQSSLLHPGVFGFVERFLVWHGQKILFAALFYASLSPISVFGFVYLLGLVICTTFP
KSSSVPSKLFLIYTGFLVSAEYLFQLWGMQAQMFPGQKYAELSFYLGLRVYEPGFWGIES
GLRGKVLVVAACTLQYNVFRWLERTPGLTIIKGKYDEPCPLFVSAEDTTASVSGYNGENL
PSTDHSSLSMKQGEVTGNSWPFFSARDNQAAGFLHPKTRGSESGSSRKFSFGHLTHFWGS
IKESHRWNRRRILALKKERFETQKNLLKIYLKFSIENMFNLYGLEINMIALLLASFALLN
AISLVYIALLAACVLLRRRLIQKLWPVVVFLFASILSVEYVATWNNLLPSDQAPSETSVH
CHDCWSIAVLNFKFCRDCWLGVRVDDPRTLISYFVVFMFACFKLRSDHISSFSQSSTYHQ
MKSQRKNSFVWRDLSFETKSMWTVLDYLRLYCYIHLLDVVLILILITGTLEYDILHLGYL
AFALVFARMRLEILKKKNKIFRFLRVYNFVLIILSLAYQSPFVGNFNDGKCETVDYIYEV
IGFYKYDYGFRITARSALVEIIIFMLVSLQSYMFSSQEFDYVSRYLEAEQIGAIVREQEK
KAARKTEQLQQIREAVEKKRQRNLQVEKMKSEMLNLRVQLHRMSSESNFGLTSPRTEGLR
RRRNPYFIPDSGAASPEIDGVVHRKEEQPIVEDPRYPFEAHELPLSTTPDAPDSPECLFG
ASPCEITEVQQDLEVMPMEHERKEKSEGKDNPLISAVQLIGDGVSQVQFIGNQAVNNLVN
FLNISPENSDTNEQSSVDDEVYDEMESQKRKHKPFERSTSLQSDRSSDGASFQIGRILRH
IWSRMQSNNDIVCYCCFIIAFLWNFSLLSMVYLAALFLYALCVHTGPTHIFWVLMLMYTE
IYILLQYLYQIIIQHCGLSIDAPLLHELGFPTQRIKSSFVVSSLPLFLIYIFTLIQSAIT
VKDGDWVPSGDFTSRRNARGSQKDLARSSWSKRILNVCKKLRDGATLVMRGICRYWISLT
RGAESPPYFVQVTMDVHMWPEDGIQPERVECRMNQLIRLVHNERCEKENPDLCPYSSRVH
VQSIERSTETPNEALVVLEVEYASPRNGCCSAEWYKSLTPASDVAKEIRKAQHSGLVEGT
GFPYPILSVIGGGKRETDLYAYIFGADLMAFFLVAIFYQSVIKNKSEFIDVYQLEDQFPV
DFVIILMVIFFLIVVDRVIYLCSFATGKVVYYLFSLILFTYAVTEYAWSIYPTQQHAAGL
ALRFIFLAKAMSLALQAIQIRYGLPHKSTLYRQFLTSEVSRINYYGYRLYRALPFLYELR
CVLDWSCTATSLTMYDWLKLEDVNASLYLVKCDTVLNRATHKHGERQTKMTKCCNGICLF
FILLCVIWAPMLMYSSGNPTNIANPIKDASVQIDIKTVGGKLTLFQTTLCKRISGDNIDL
GLDLGSQSFLPTYNKNDIQLICCQADASVLWLVPDTIVTRFVQSLDWDTDMDISFSWVLN
RDRPKGKETVKYERSVDPQDLPKRSDVQMVLNGSMDGFRVHNLYPKFFRVTGSGDVRSFE
DQEDEVSADIVMNHADSKWWWSFHNLKASENISACEGMDGPVAIIMSEETPPQGFLGDTL
SKFSIWGLYITFVLAVGRFIRLQCSDLRMRIPYENLPSCDRLIAICEDLYAARAEGELGV
EEVLYWTLVKIYRSPHMLLEYTKLDYDA
NT seq
7467 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttttcttctcggcttcttgttgccttccctacttctcgcagctgcacttatt
aactggagtctcatttcctttgttgatttgattgcttttctcctccttcactatattgcc
cctgaaattggataccgttttcagaggagtcattgcctcttatggcccctcttcttcttt
tcatgtgtaatcattgtttcccaagttgtgtaccttttcatttgggattctctaggccca
gactgggacacttcagatactggctggatcactcttactggctttatgatactgaagtct
tggagaaaccccactgtcatgtatttcttggctttacaactactagcatcgctagtttca
ttagcttacatttacactagtagattcggcttccttccatggccgtacacatgttggtct
cacttttcacatgtttttgaacatctaggaagtcatcttagggttgcctcctgcctgttc
ttaccagcagttcaattggcagtgggaatttgcaatccttcatggatgtctttgccattt
tttattggtagctgtgctggtcttgtggactggtccttgactagcaacgtttcaggactt
ttcaggtggtggagagttctttacatctactcaggattcaacatcgtcctgctttacctc
tatcagttaccaataaacttttccgatatgattcgatggatagcaagctttataggtcta
ttcagaatctctgcggaaactgaaggccctgatatttgttctggtcttttccttttgctc
ttcttcatcatgctttcctatgtaaggtcagatctcgaggatatggactttttcatgtcc
acgagtgaaaataacttggctgagcgtcttcttcctccaaaatattcgttttttattcga
gaatcaagggctggtgtaaggcacaccaatgttctactgaggggatctgtgtttaagacg
tttagtatcaatttctttacatatggttttccggtctctctgtttgctctttcgttctgg
agctttcattttgcgagcttgtgtgcgtttggcctccttgcatatgtttgttacattatc
tatgccttcccgtccttgttccgcttgcacagattaaatggccttcttcttgtatttata
ctcttctgggctgtcagtacgtacatattcaatgtggcattttcctttctgaacactaag
gttggaaaggacatgaaaatttgggagatggtgggcctttggcattacactatacctgga
ttctttttgcttgcacaatttggtttggggatgttggttgcattgggtaatcttgtgaac
aactctgtttttctctacctgtctgaagagagctccagatcttccaatgatagatcttat
gctgaagctgatgaagaaacaaaggtgttggttgtcgccaccattgcttggggattgcgg
aaatgttcacgggctattatgctcgcactgattttcctcattgccatgaaacctgggttt
gtccatgcagtgtatgtggtattcttccttatatatctgctgagccacaacatcaacaga
aagatacgcaagtcattgattcttctatgcgaagttcattttgcacttctctacattctt
gagatcgatcttgtgtcgaactccttaaagcggcaaggctcggtgagcagagaaattctg
tttcagttaggtctccttaggtctgaaagctcttgggacttcttggagatagccttgctt
gcttgcttctgtgctatccataatcatggttttgaggtgctattttccttctcagcaatt
gtacgccatacaccaagccctccaattggatttagcatattgaaagctggtctcaacaaa
tcagttctcttgtccgtctactcatctccatcttcaagttattcccaggataatactact
tatgagagacatattgcttcgtttctgagtgcgattgggcaaaagtttctgtctatgtac
cgatcatgtggaacatacattgctttcatcactattctcataagtgtatacctggtgaaa
cccaattatgtatcgtttggatatattttccttctcttgctctggattactggaagacaa
ctgtttgaggaaactaagagacgcttgtggttccctctgaaagtatatgctttttcggtg
tttatgtttatctactgcttaagtagctttgtcagcttgcagctttggttatctggatat
atcgatctctacttttttttgggttacaattccaaagcaccattgctggataatgtatgg
gaatctctcgctgtcttggtcgtgatgcaactttacagctacgaaaggaggcaaagtgga
cattacattccaggtcaatctagtttgcttcatcctggagtttttggttttgttgagaga
tttttggtatggcatggtcagaagatcttgtttgcggcattgttttatgcatcattgtct
ccaatcagtgtgtttggatttgtatatctccttggccttgtcatctgcacaaccttccca
aagtcttcttcagtaccatccaaattatttttgatctatactggatttctcgtgtctgcg
gagtatcttttccaactgtggggcatgcaagctcagatgttccctgggcaaaaatatgcg
gagttgtctttctacttgggccttcgagtatatgaacctggattttggggtatagaatca
ggtctacgaggcaaagtgctggttgttgctgcctgcaccctgcaatacaatgtatttcgt
tggctagaaaggacacctggtttaactattatcaaaggaaaatacgacgagccttgcccc
ctgtttgtctctgcagaagacaccactgcaagtgtttccggttacaatggtgaaaaccta
ccgtcaacagatcattcttctttatcaatgaaacaaggcgaggttactggtaactcatgg
cctttcttctctgcccgtgataatcaggcagctggttttttgcatcccaagaccagaggc
tctgaaagtggcagtagtaggaagttttcatttggtcacttgactcacttttggggaagc
atcaaagagagtcacaggtggaacaggaggaggattttggcattgaagaaggagaggttt
gaaacgcagaaaaatctgttgaaaatttacttgaaattttcgattgagaatatgtttaac
ctctatggccttgagataaacatgattgcgctgcttcttgcaagttttgctttgttgaat
gccatctccttggtatatattgcgctgcttgctgcatgtgtcctcttgagaagacgccta
attcagaaactatggcctgtcgttgtttttctgtttgcatcaatactctcagttgagtac
gttgccacttggaataacttattgccttccgatcaggctccaagtgaaactagtgtccat
tgccatgactgctggagcattgcagttctcaactttaaattttgccgggactgttggctt
ggagtgagagtagacgatccccggacgcttattagctatttcgtggtgttcatgtttgcc
tgcttcaaacttcggtctgatcacatatccagtttctctcagtcctcaacatatcatcag
atgaagtctcaaagaaagaactcatttgtctggagagatctctccttcgaaacaaagagc
atgtggaccgtgcttgattacctgaggctttattgttacattcatctgctggatgttgtg
cttattctcatcctaatcacaggaaccctcgagtatgacattctacacctgggttacctt
gcattcgctcttgtttttgcccggatgcgacttgaaatactgaagaagaagaacaaaata
ttcaggttcttgcgagtctacaattttgttctcattatcctttctctcgcatatcagtct
ccatttgtgggaaacttcaatgatggaaagtgtgaaacggttgattatatttacgaggtg
attggattttacaagtatgactatgggtttcgaatcactgcaagatctgctctcgttgag
ataatcatatttatgctagtatctcttcagtcctacatgttttcctcccaggagtttgat
tatgtctcacggtatcttgaagcggagcaaattggtgctattgtgcgggagcaagaaaag
aaagcagcgcggaagaccgaacaactgcaacagattcgtgaggctgtagaaaagaaacgg
cagcgaaatttgcaggtggaaaagatgaagtctgaaatgctgaacctgcgggtacagctt
cacagaatgagttctgagtctaattttggactcacttctccgcgcactgaaggtctaaga
aggaggaggaatccgtattttattccagatagtggtgcagccagtcctgagattgacgga
gtagtccacaggaaagaagaacagcctattgtcgaggatccacggtatccttttgaagct
catgagcttcctctcagtaccactccagacgcaccagattctccagagtgtttatttggg
gcatctccttgtgagatcactgaagttcagcaggatcttgaggtcatgcctatggaacat
gaaagaaaggaaaagtcagagggaaaagataatccattgatttctgctgtgcaactcatc
ggtgatggtgtttcccaagtacaatttattgggaatcaggcagtaaataaccttgtgaac
ttcttaaacatctcgccggaaaattcagatacaaatgagcagtcctctgtagatgatgag
gtgtatgatgagatggaaagtcaaaaaagaaaacacaaaccttttgaaaggtcaacatct
ctacaatcagacagaagtagtgatggcgctagctttcagataggaaggatccttcgtcat
atatggtctaggatgcagtccaacaatgatattgtttgctactgctgcttcattattgcg
ttcctgtggaatttcagtcttctttccatggtctatctggcagcgttgttcctatatgcc
ctctgcgttcacacaggccctactcacatcttctgggtcctcatgctaatgtacacagaa
atctatatcctcctccagtatttataccagattataatccagcactgtgggttgagcatt
gacgctcctcttcttcatgaactgggatttccgacacaaagaatcaaatcatcgtttgtt
gtcagctcgttgcctctcttccttatttacatattcactctcatacagagcgccataaca
gtgaaagatggtgattgggttccttctggagattttacttcgcggcggaatgctcgtggg
agccagaaggaccttgcaagaagtagctggagcaagagaatcttgaatgtgtgcaagaag
ttgagagatggggcgacattggtgatgagaggcatctgccggtactggatctcgctgaca
cgtggagcagaatcccctccttactttgttcaggtgacaatggatgttcacatgtggcct
gaagatggaattcagcctgaaagagttgaatgccgaatgaatcaattgattaggcttgtt
cacaatgagagatgcgagaaggaaaaccctgatctttgtccttactcaagcagggtccac
gtacaaagtatagagagaagtacagagaccccaaacgaggccctggttgtcctcgaggtt
gagtatgcttctcccaggaatgggtgttgttcagcagaatggtacaaatcactcacccca
gcctcagatgtggcgaaagaaattcgcaaagctcaacatagtggacttgttgaaggaact
gggtttccgtaccccatcctctctgtgattggcggaggaaagagagaaacagacctctat
gcttacatatttggtgctgatttgatggccttctttctggttgccattttctaccaatca
gtcattaaaaataaaagcgagtttattgatgtatatcagctagaggaccagttcccagta
gactttgtcattattctaatggttatcttcttcctgattgttgttgatcgtgtcatctat
ctttgctcatttgcgactggaaaagtggtatactacctcttcagtcttattctcttcaca
tatgcagtgacagagtatgcttggagcatatatcctacgcagcaacacgccgctggcttg
gctctcagattcatatttcttgccaaagcaatgtcactagctctccaggccatacaaatc
cgctatgggctacctcataagagcaccctataccggcagtttctgacaagtgaagtttca
aggatcaattactacggctacagactttaccgtgctcttcctttcctgtatgaactgaga
tgtgtacttgactggtcctgcacagccacatcactgacaatgtatgactggctcaagttg
gaagatgtaaatgcgagtttgtaccttgtcaaatgcgatacagttttaaatcgagctaca
cacaaacatggggagaggcaaacaaaaatgactaaatgctgtaacgggatatgtctcttc
ttcatcttgttatgcgttatatgggctcctatgctgatgtatagcagtggtaacccaaca
aacattgctaaccctataaaagatgcgagcgttcaaattgatataaaaacagttggtgga
aagcttactctgttccaaacaaccctgtgcaaaagaatctcaggggataacattgatctt
gggctagatctcgggtcccaaagcttcttgccaacgtacaacaaaaatgacatccagctg
atatgctgccaagctgatgcaagcgttctatggcttgtccccgacacaatcgtgaccaga
ttcgttcaatccctggactgggacacggatatggacataagtttttcttgggtccttaac
agagaccgacccaaaggcaaggagactgtcaagtatgaaagaagtgtggaccctcaggac
cttccaaaacgctctgatgtgcaaatggtcctcaatggctcaatggatggatttagagtg
cacaacttatacccaaagtttttccgtgttactggctctggtgatgtcaggtcttttgag
gaccaggaggatgaagtgagtgcagacatagtcatgaaccatgcagattccaagtggtgg
tggtcattccataatcttaaagcgtctgaaaatatcagcgcttgcgagggtatggatgga
ccagttgctataataatgtccgaggaaacacctccgcaggggtttcttggtgacacgctg
agcaaattcagtatatgggggctctatataacatttgtactagcagtggggcgttttatc
aggcttcaatgctctgacctgcgtatgagaataccttacgagaacctgccttcgtgtgac
agattaatagcaatatgtgaggacttatacgcggcgagggcggagggtgagcttggagta
gaagaagttctatactggacgcttgtgaagatctatagatccccacacatgctgcttgag
tatacaaagctagactatgatgcttag
DBGET
integrated database retrieval system
