Raphanus sativus (radish): 108811619
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Entry
108811619 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein 70 kDa-like
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108811619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108811619
Spliceosome [BR:
rsz03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
108811619
Complex B
108811619
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
108811619
NCBI-ProteinID:
XP_056845776
UniProt:
A0A9W3C2S2
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Position
6:complement(45032978..45036340)
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AA seq
427 aa
AA seq
DB search
MGDLNDPFMRNQNAAVQSRTKVQNRSNVLQLKLMGQSHPTGLTPNLLKLFEPRPPLEFQP
PPEKRKCPPYTGMAQFVSHFAEPEDPEYAPLKPDVETPAQKRERIHKSRLEKGVEKAAED
LKNYDPNNDPNASGDPYKILFVARLNYETSESKIKRKFEAYGPITQVHVVTDQQTNKPRG
YAFIEYLNTRDMKAAYKQGDGKKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVPGEK
ISGEEEKQQQQQASQGRSSRSEEPRAREDREKSRDRGKEKEREQSHERSRERSRDRPVES
RREDKHHMDRDRGRDRESRRDRGDSDRRTRDHDRDRSRKRERDYESGEYEDDGGRFRERG
ESKQRRGEAEEGGGRRRSSSHYDEREXGGDRDRYDQYGDRYGLVEEEEYRYDDREYKRSE
RSKSRDY
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggggacttaaacgatcctttcatgcgtaaccaaaatgctgccgtacagtcacgcact
aaggttcagaaccgatcaaatgttcttcagcttaagctgatgggtcaaagccatcccaca
ggcttgacgcccaatcttttgaagctctttgagccacgacctcccttggagttccagcca
ccacctgagaagagaaaatgccctccttatacaggcatggctcaatttgtgagtcacttt
gctgaacctgaagatccagagtatgctccacttaagccggatgttgaaactcctgcacaa
aaaagggagagaattcacaagtcacgactcgagaaaggtgttgaaaaggctgcagaggat
ctaaagaattatgatccgaataatgatcccaatgcttctggagatccatacaagatactg
tttgttgcaagacttaactacgagacctctgagagtaagattaaaaggaagtttgaggct
tatggaccaattacgcaggttcatgtggtaacagatcagcaaaccaataaacccagaggc
tatgccttcattgagtacttaaacactcgtgacatgaaagcggcctacaaacagggtgac
ggaaagaagattgatggtagaagagtgctggtggatgttgagagaggtagaacagtcccg
aactggcgtcctcgtaggcttggtggtggacttggtacaagcagagttcctggtgagaag
attagtggcgaggaggaaaaacaacaacaacaacaagcatcgcaaggaaggtcatcccgc
tccgaggaacctagagcccgtgaagaccgtgagaaatctcgtgataggggcaaagaaaag
gaacgcgagcagtctcacgagcggtcccgtgaacggtctcgggatagaccggtagagagt
cgtagagaggataagcaccacatggacagggaccgtggtagagacagagagagcaggcgt
gaccgaggagatagtgaccgtcgtacacgggatcacgatcgtgaccggagtcgtaaaagg
gaaagggactacgagagtggcgagtatgaagacgatgggggaagatttcgtgagagaggt
gagtcgaagcagaggagaggagaggcagaggaaggtggtgggcgtagacgttcatcaagc
cattatgatgagcgtgagngaggaggtgacagagaccgttatgatcagtacggcgaccgt
tatgggctagtggaggaagaggaataccgttatgatgatcgtgagtacaagcggtcagag
cggtctaagtcgcgtgattattga
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